prot_Ecto-sp9_F_contig9691.17795.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9691.17795.1
Unique Nameprot_Ecto-sp9_F_contig9691.17795.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length106
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9691.17795.1 vs.
Match: GH95 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0Q6_9PHAE)

HSP 1 Score: 182 bits (463), Expect = 1.880e-54
Identity = 82/96 (85.42%), Postives = 85/96 (88.54%), Query Frame = 0 
Query:   11 KECRSLCVREGRCLKWTLQLKEMICWLKDAGGTRNEGVPGLRSGVVRDEEDKTIPKPRYGKEPXXXXXXCCPDAAAEPPADVHALDLWDDEPGADW 106
            KECRSLCVR+GRCLKWTLQLKEM+CWLKDAGGTRNE VPGL SGVVRDEED TIPKPRYGKEP      CCPDAA EPPA VHALDLWDDEPG+DW
Sbjct:   93 KECRSLCVRDGRCLKWTLQLKEMVCWLKDAGGTRNEDVPGLTSGVVRDEEDTTIPKPRYGKEPPPPPLQCCPDAAGEPPAGVHALDLWDDEPGSDW 188
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BLAST of mRNA_Ecto-sp9_F_contig9691.17795.1 vs.
Match: Alpha-L-fucosidase, (family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKT5_ECTSI)

HSP 1 Score: 184 bits (467), Expect = 5.560e-52
Identity = 91/96 (94.79%), Postives = 93/96 (96.88%), Query Frame = 0 
Query:   11 KECRSLCVREGRCLKWTLQLKEMICWLKDAGGTRNEGVPGLRSGVVRDEEDKTIPKPRYGKEPXXXXXXCCPDAAAEPPADVHALDLWDDEPGADW 106
            KECRSLCVR+GRCLKWTLQLKEMICWLKDAGGTRNEGVPGLRSGVVRDEEDKTIPKPRYGKEPXXXXXX  PDAAAEPPA VHALD+WDDEPGADW
Sbjct:  172 KECRSLCVRDGRCLKWTLQLKEMICWLKDAGGTRNEGVPGLRSGVVRDEEDKTIPKPRYGKEPXXXXXXXXPDAAAEPPAGVHALDVWDDEPGADW 267
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9691.17795.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
GH951.880e-5485.42protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Alpha-L-fucosidase,5.560e-5294.79family GH95 n=1 Tax=Ectocarpus siliculosus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.50.4.10coord: 6..58
e-value: 1.9E-5
score: 26.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9691contigEcto-sp9_F_contig9691:1059..2629 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9691.17795.1mRNA_Ecto-sp9_F_contig9691.17795.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9691 1059..2629 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9691.17795.1 ID=prot_Ecto-sp9_F_contig9691.17795.1|Name=mRNA_Ecto-sp9_F_contig9691.17795.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=106bp
MTDSICFACLKECRSLCVREGRCLKWTLQLKEMICWLKDAGGTRNEGVPG
LRSGVVRDEEDKTIPKPRYGKEPPPPPVQCCPDAAAEPPADVHALDLWDD
EPGADW
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