prot_Ecto-sp9_F_contig9688.17790.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9688.17790.1
Unique Nameprot_Ecto-sp9_F_contig9688.17790.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length433
Homology
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Cyclin (n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI)

HSP 1 Score: 678 bits (1750), Expect = 2.130e-243
Identity = 402/432 (93.06%), Postives = 404/432 (93.52%), Query Frame = 0
Query:    1 MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGTGDRGRGGATGSGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTVGDHGGISGDQGGFAGGADILVVGVKSGDGGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESAAGKDGSSETTAKGXXXXDSTKSSDGRPEAEAIAREAGGE 432
            MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQ TTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGL NDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESG GDRGRGG TG   XXXXXXXXXXXXXXXXXXXXXXXXXX    XXX        XXXXXXXXXXXXXXXTVGDHGGISG+QGGFAGGAD+LVVGVKS DGGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGES AGKDGSSE TAKG    DS KSSDGRPE EAIAREAGGE
Sbjct:    1 MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQGTTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLANDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGMGDRGRGGGTGX--XXXXXXXXXXXXXXXXXXXXXXXXXXHGGLXXXVNGQHVVTXXXXXXXXXXXXXXXTVGDHGGISGNQGGFAGGADVLVVGVKSSDGGRGGDEDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESTAGKDGSSEITAKGGGGGDSAKSSDGRPEEEAIAREAGGE 430          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Cyclin-like (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQW0_9STRA)

HSP 1 Score: 207 bits (526), Expect = 3.180e-60
Identity = 112/216 (51.85%), Postives = 136/216 (62.96%), Query Frame = 0
Query:    4 DVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRD-VILTTCLFLAGKVTEAPRRLRDVINVLHMLNST---GQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYS 215
            ++ +LR ++PAL          S  ED   R  W   +FRAG+RLR+PQETT TA++LFHRF   E     +R R  V+L TCLFLAGKV E PRRLRDVIN LH+  +    G  EPP LD+AYW MKE++VE EQ +LR I F +D   PYRLLLNYARSLRL R   + AWG  ND LF P AL   PP +ACA I +AAR+      L W +
Sbjct:    9 NLAALRHLSPALSSGATSRSGGSQ-EDLRRRRGWTAAMFRAGHRLRYPQETTSTAIILFHRFCESEAQALRQRDRRLVVLVTCLFLAGKVRETPRRLRDVINCLHVTAAEPGGGAVEPPRLDQAYWDMKEQVVECEQAVLRIIGFDMDGEHPYRLLLNYARSLRLSRELVQLAWGFVNDFLFIPSALELSPPTLACAAISLAARLTDELNDLNWIT 223          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Cyclin-l1 (n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_9STRA)

HSP 1 Score: 131 bits (330), Expect = 1.070e-30
Identity = 88/235 (37.45%), Postives = 115/235 (48.94%), Query Frame = 0
Query:   33 LRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSR--DVILTTCLFLAGKVTEAPRRLRDVINVLHMLN------------------STGQDEPPL----------------------------------LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRA-LSAPPPAVACAVIRMAARV---HGGDR 209
            +R +  +VL  AG RLR PQET  TA L+FHRF     + ++ R+R  DV+LTTCLFLA KV E PRR+RD IN ++++                   S G D   L                                  LD+ YW +KE +V+ EQ++LR + F ++    YRLLLNYARSLR        AW L ND LF P   L+ P  A A A + +A R+    GGDR
Sbjct:   34 IRQDSVRVLLDAGRRLRLPQETIATAALIFHRFFAVRSLREYARNRRLDVVLTTCLFLASKVEEQPRRIRDAINCVYVVRKQLLAQAQGTRFVDTCAPSEGGDAETLSERGWVHGNGNGGAPGELKGNTDLARSVKGNILSLDRGYWDLKESVVDTEQLVLRILGFDLETFMSYRLLLNYARSLRARPVLVEVAWALLNDSLFSPACCLALPSHAQAVAALDLAQRLLTAAGGDR 268          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CMQ2_9STRA)

HSP 1 Score: 109 bits (273), Expect = 1.710e-24
Identity = 71/168 (42.26%), Postives = 85/168 (50.60%), Query Frame = 0
Query:   14 ALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPL-LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVL 180
            AL     RH D +  ED  LR          G  L  PQ T   AV   HRF I     KH     V+ T CLFLA KV E PRRLRDV+N    +  +  D PPL LDKAYW +KE +V  EQ++LR + F      P R +LN +R+L LD    + A  L ND L
Sbjct:   24 ALAAAAARHADVTPEEDRTLRRACWAFACDVGLGLDVPQNTVAAAVQFCHRFFIVNSFRKH--DPYVVSTACLFLACKVEETPRRLRDVLNCAWAVRYS--DAPPLALDKAYWHLKEVMVSTEQLVLRALAFATRVEAPSRWILNLSRALDLDNGVVQVALALANDAL 187          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Uncharacterized (protein n=1 Tax=Plasmodiophora brassicae TaxID=37360 RepID=A0A0G4IYJ5_PLABS)

HSP 1 Score: 109 bits (273), Expect = 7.250e-24
Identity = 68/194 (35.05%), Postives = 98/194 (50.52%), Query Frame = 0
Query:   25 PSDAEDAALRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPL-LDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAAR---VHGGDRRLRWY 214
            P+D E + +R +   ++   G RL+ PQ T  TA  +FHRF  +E +  H      I  TCLF+AGK  E PRRLRDVIN ++   +   D PPL +   +W MKE ++E E+++LR I F VD   P+   +++ R LR           + ND    P  L   P  +AC  + +A     V  GD    W+
Sbjct:    3 PAD-EGSVIRFQATTLIQDVGIRLQVPQMTIATAQTIFHRFFAKEPLADHDPMD--IAQTCLFVAGKSQETPRRLRDVINTVYRYRNP--DLPPLEVADPFWQMKEHLIESERLVLRVIAFDVDVVPPHAYAVHFLRDLRASNDLANCTLSILNDSCRIPLCLHYEPHVIACGAMYLATELLSVRPGDGDDEWF 191          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0I6B2_9EUKA)

HSP 1 Score: 112 bits (281), Expect = 1.980e-23
Identity = 60/163 (36.81%), Postives = 91/163 (55.83%), Query Frame = 0
Query:   41 LFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAAR 203
            L  AG +LR PQ +  TA++ +HRF  ++    + R R  I TTCLFLAGKV E P++++DV+   +         P    K +W +KE I+  E++LL+T++F +     YR LL Y +S++  R   + AW   ND L    AL  PP  VA + + +A+R
Sbjct:   89 LQEAGQKLRLPQLSIATAIVFYHRFYSRKSYDSYDRFR--IATTCLFLAGKVEETPKKIKDVVIEAYKAQHQKPTGPEPESKEFWALKEEILVCERILLQTLDFDLTVEHAYRPLLAYVKSIKGTRDLAQVAWNFINDSLRTTIALQYPPRCVAASAVHLASR 249          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Uncharacterized (protein n=1 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0S947_ALLM3)

HSP 1 Score: 108 bits (271), Expect = 4.100e-23
Identity = 75/206 (36.41%), Postives = 108/206 (52.43%), Query Frame = 0
Query:    8 LRCVAP--ALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLH--MLNSTGQDEPPLLD---KAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAA-TRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAARVH 205
            L  VAP  AL   P+  ++     +  LR+    ++ RAG  L  PQ + GTA +L HRF     + K    RD++L   LFLA K+ E PRR+RD+INV+H  +L   G  +PP+LD     Y  ++  ++  E  LL+ + F V    P+  L+NY +++RL R    +TAW   ND    P      P  VACA I++AA  H
Sbjct:    9 LNTVAPPAALDRTPSMDHEIDPQLELRLRILACDLIQRAGRALSIPQFSVGTAQVLLHRFYFAASLKKFG-VRDMVLGA-LFLATKLEETPRRMRDIINVVHHAVLLQQGHPDPPMLDVHGMEYADLERAMMRAEMYLLKYLAFHVHVAHPHMWLVNYLQAMRLARPPLAQTAWNYVNDSYRLPLLCMVQPHVVACAAIQLAADDH 212          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Uncharacterized (protein (Fragment) n=3 Tax=Sauria TaxID=32561 RepID=A0A2D4H7H0_MICLE)

HSP 1 Score: 105 bits (263), Expect = 1.210e-22
Identity = 62/176 (35.23%), Postives = 95/176 (53.98%), Query Frame = 0
Query:   33 LRLEWAKVLFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPP---LLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAAT--RTAWGLTNDVLFCPRALSAPPPAVACAVIRMAAR 203
            LR+   +++  AG  LR PQ    T  +LFHRF   +   KH  S +++   C+ LA K+ EAPRR+RDVINV H L        P   +LD+ Y   K ++++ E+ +L+ + F V    P+++++ Y + L  +R  T  +TAW   ND L     +   P  +ACA I +AAR
Sbjct:   52 LRILGCELIQAAGILLRLPQVAMATGQVLFHRFFYSKSFVKH--SFEIVAMACINLASKIEEAPRRIRDVINVFHHLRQLRIKRTPSPLILDQNYINTKNQVIKAERRVLKELGFCVHVKHPHKIIVMYLQVLECERNQTLVQTAWNYMNDTLRTNVFVRFQPETIACACIYLAAR 225          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Cyclin-related (protein FAM58A-like isoform 1 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YAW3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 1.350e-22
Identity = 64/164 (39.02%), Postives = 93/164 (56.71%), Query Frame = 0
Query:   47 RLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAARV---HGG 207
            RL      T TA+LL HRF  Q+           I  +C+FLA K+TE PR+LRD++NV + + +   + P  +   Y  MKER+++ EQ +LR + F++D   PY  LLNYA+ LR  RA  + A  LT+D  + PR+LS   P +A A + +A  +   HGG
Sbjct:   22 RLHLGYIPTTTAMLLSHRFYAQK--SPQTFPFMDIGASCIFLATKLTEKPRKLRDIMNVAYSI-AHKTNSPVPVGSVYTAMKERLLDAEQNILRVLRFELDMDLPYMYLLNYAKFLRCSRATVQVALTLTSDFFYAPRSLSYDAPIIAAACLYVALSLVGEHGG 182          
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Match: Hypothetical (protein n=2 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0PZF2_9EUKA)

HSP 1 Score: 108 bits (270), Expect = 1.440e-22
Identity = 62/179 (34.64%), Postives = 93/179 (51.96%), Query Frame = 0
Query:   41 LFRAGYRLRFPQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLRDVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPDPYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRMAARVHGGDRRLRWYSPPVQ 219
            L  +G +LR PQ T  TA++ +HRF   +    +   R  I TTCLFLA KV E P++L+DV+   + + +  +  P    + +  +KERI+  E+VLL+T+ F +    PYR LL Y +S++  R   + AW   ND L     L   P  V+ A + +AAR         +  PP Q
Sbjct:   63 LQESGQKLRLPQLTIATAIVFYHRFFAHKSYEGY--DRFTIATTCLFLASKVEETPKKLKDVVTETYKIQNAPKAAPEPESQDFKDLKERILVSERVLLQTLGFDLTVEHPYRPLLAYVKSIQGTRDLAQVAWNFINDSLRTTICLQYAPRCVSAAAVALAARYLSDRHGTLYVLPPHQ 239          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9688.17790.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cyclin2.130e-24393.06n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LB66_ECTSI[more]
Cyclin-like3.180e-6051.85protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Cyclin-l11.070e-3037.45n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TSF1_... [more]
Hypothetical1.710e-2442.26protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014... [more]
Uncharacterized7.250e-2435.05protein n=1 Tax=Plasmodiophora brassicae TaxID=373... [more]
Hypothetical1.980e-2336.81protein n=1 Tax=Phaeocystis antarctica TaxID=33657... [more]
Uncharacterized4.100e-2336.41protein n=1 Tax=Allomyces macrogynus (strain ATCC ... [more]
Uncharacterized1.210e-2235.23protein (Fragment) n=3 Tax=Sauria TaxID=32561 RepI... [more]
Cyclin-related1.350e-2239.02protein FAM58A-like isoform 1 n=1 Tax=Achlya hypog... [more]
Hypothetical1.440e-2234.64protein n=2 Tax=Coccolithus braarudii TaxID=221442... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013763Cyclin-likeSMARTSM00385cyclin_7coord: 153..383
e-value: 6.7
score: 2.3
coord: 39..140
e-value: 5.4E-7
score: 39.2
NoneNo IPR availableGENE3D1.10.472.10coord: 14..146
e-value: 3.1E-31
score: 110.1
NoneNo IPR availableGENE3D1.10.472.10coord: 149..228
e-value: 3.0E-9
score: 39.1
NoneNo IPR availablePANTHERPTHR10026CYCLINcoord: 24..392
NoneNo IPR availableSUPERFAMILY101447Formin homology 2 domain (FH2 domain)coord: 304..313
IPR006671Cyclin, N-terminalPFAMPF00134Cyclin_Ncoord: 19..146
e-value: 6.7E-14
score: 51.7
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 151..387
IPR036915Cyclin-like superfamilySUPERFAMILY47954Cyclin-likecoord: 19..146

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9688contigEcto-sp9_F_contig9688:1955..4063 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9688.17790.1mRNA_Ecto-sp9_F_contig9688.17790.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9688 1654..4063 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9688.17790.1 ID=prot_Ecto-sp9_F_contig9688.17790.1|Name=mRNA_Ecto-sp9_F_contig9688.17790.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=433bp
MEIDVGSLRCVAPALGIPPNRHYDPSDAEDAALRLEWAKVLFRAGYRLRF
PQETTGTAVLLFHRFLIQERVGKHRRSRDVILTTCLFLAGKVTEAPRRLR
DVINVLHMLNSTGQDEPPLLDKAYWTMKERIVEFEQVLLRTINFQVDPPD
PYRLLLNYARSLRLDRAATRTAWGLTNDVLFCPRALSAPPPAVACAVIRM
AARVHGGDRRLRWYSPPVQKISKRRREEEGDAIGGRDLGKVESGTGDRGR
GGATGSGGGGSVVPPTERPAPPPPPPPPFPPPHGGLGGGVNGQHVVTAAG
APPPPPPPPPPPPPTVGDHGGISGDQGGFAGGADILVVGVKSGDGGRGGD
EDQGDETATKPWWRLFDARDEEVELVCSELLALYRAHGDGESAAGKDGSS
ETTAKGGGGGDSTKSSDGRPEAEAIAREAGGE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013763Cyclin-like
IPR006671Cyclin_N
IPR036915Cyclin-like_sf