prot_Ecto-sp9_F_contig968.17783.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig968.17783.1
Unique Nameprot_Ecto-sp9_F_contig968.17783.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length153
Homology
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJF8_ECTSI)

HSP 1 Score: 230 bits (586), Expect = 6.930e-74
Identity = 143/152 (94.08%), Postives = 143/152 (94.08%), Query Frame = 0
Query:    1 MFGVLTSVLARECRSVVTGRMAGALFAAGTTCVATRCASKXXXXXXXXXXXXXXXRLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 152
            MFGVLTSVLARECRSVVTGRMAGALFA GTTCV       XXXXXXXXXXXXXXX LGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM
Sbjct:   99 MFGVLTSVLARECRSVVTGRMAGALFA-GTTCVXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 249          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD88_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 3.760e-73
Identity = 140/152 (92.11%), Postives = 141/152 (92.76%), Query Frame = 0
Query:    1 MFGVLTSVLARECRSVVTGRMAGALFAAGTTCVATRCASKXXXXXXXXXXXXXXXRLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 152
            MFGVLTS LARECRSVVTGRMAGALFA GTTC        XXXXXXXXXXXXXXX LGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAM+PGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM
Sbjct:    1 MFGVLTSALARECRSVVTGRMAGALFA-GTTCXXXXXXXXXXXXXXXXXXXXXXXXLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMHPGFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYVSM 151          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: Ribosomal (protein L27 n=1 Tax=Blastocystis hominis TaxID=12968 RepID=D8M2M0_BLAHO)

HSP 1 Score: 91.7 bits (226), Expect = 4.370e-21
Identity = 39/69 (56.52%), Postives = 57/69 (82.61%), Query Frame = 0
Query:   57 LGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDT 125
            LG+KKFGGE V+ GNII+RQRGT+F+PG+GVGMG+DHTL+A+  G+V F+ +PF K++T+ + +  + T
Sbjct:   33 LGLKKFGGEKVIPGNIIMRQRGTKFHPGQGVGMGRDHTLYALTEGYVHFTWNPFNKKQTIDITEKPMPT 101          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XKB3_9STRA)

HSP 1 Score: 90.9 bits (224), Expect = 1.150e-20
Identity = 47/63 (74.60%), Postives = 51/63 (80.95%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSV 118
            RLGVKKFGGE VVAGNIIIRQRGT++YP KGVGMGKDHTLFA   GFV F  +   KR+ VSV
Sbjct:   42 RLGVKKFGGEAVVAGNIIIRQRGTKYYPSKGVGMGKDHTLFATRDGFVRFWWNVPKKRQEVSV 104          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: 50S (ribosomal protein L27 n=1 Tax=Kordiimonas sediminis TaxID=1735581 RepID=UPI001748C73E)

HSP 1 Score: 89.4 bits (220), Expect = 1.450e-20
Identity = 42/52 (80.77%), Postives = 46/52 (88.46%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSR 107
            RLGVKKFGGENV+AGNIIIRQRGTQ+YPG  VGMGKDHT+FA+  G V FSR
Sbjct:   20 RLGVKKFGGENVIAGNIIIRQRGTQWYPGTNVGMGKDHTIFALIDGNVKFSR 71          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: 50S (ribosomal protein L27 n=3 Tax=termite gut metagenome TaxID=433724 RepID=A0A5J4RFV8_9ZZZZ)

HSP 1 Score: 89.4 bits (220), Expect = 1.760e-20
Identity = 46/72 (63.89%), Postives = 52/72 (72.22%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKAKVDTEA 127
            RLGVKKFGGE   AGNII+RQRGTQFYPGK +GMG+DHTLFA+  G +VF RS   KR    V    + TEA
Sbjct:   20 RLGVKKFGGEICKAGNIIVRQRGTQFYPGKNMGMGRDHTLFALIDGTIVFKRSRQDKRYVSVVPIEVIGTEA 91          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: 50S (ribosomal protein L27 n=2 Tax=bacterium TaxID=1869227 RepID=A0A522PEE4_9BACT)

HSP 1 Score: 89.4 bits (220), Expect = 1.860e-20
Identity = 42/66 (63.64%), Postives = 55/66 (83.33%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKA 121
            RLGVK+FGG++V+AGNI++RQRGT+FYPG+ VGMGKDHTLFA+ PG V F  S   +R+ V+V+ A
Sbjct:   28 RLGVKRFGGQDVIAGNILVRQRGTRFYPGENVGMGKDHTLFALVPGKVTFRES--NQRKYVTVVPA 91          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: LSU (ribosomal protein L27p n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A1W1D3F8_9ZZZZ)

HSP 1 Score: 89.0 bits (219), Expect = 2.110e-20
Identity = 44/66 (66.67%), Postives = 53/66 (80.30%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKA 121
            RLGVKK+GGE+VVAGNII+RQRGT+ +PGK VGMGKDHTLFA+  G V F R    KR+ VS++ A
Sbjct:   20 RLGVKKYGGESVVAGNIIVRQRGTKIHPGKNVGMGKDHTLFALVDGVVSFERKD-KKRKQVSIITA 84          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: 50S (ribosomal protein L27 n=9 Tax=root TaxID=1 RepID=E0UQT2_SULAO)

HSP 1 Score: 88.6 bits (218), Expect = 2.990e-20
Identity = 44/66 (66.67%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVMKA 121
            RLGVKKFGGE V+AGNIIIRQRGT+ +PGK VGMGKDHT+FA+  G V F R    KR+ VS++ A
Sbjct:   20 RLGVKKFGGEAVIAGNIIIRQRGTKVHPGKNVGMGKDHTIFALVDGIVAFERKD-KKRQQVSIIPA 84          
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Match: 50S (ribosomal protein L27 n=1 Tax=Alphaproteobacteria bacterium TaxID=1913988 RepID=A0A8I1RRQ9_9PROT)

HSP 1 Score: 88.6 bits (218), Expect = 3.730e-20
Identity = 43/64 (67.19%), Postives = 52/64 (81.25%), Query Frame = 0
Query:   56 RLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYPGFVVFSRSPFTKRRTVSVM 119
            RLGVKKFGGE + AGN+I+RQRGT+FYPG+GVGMGKDHTLFA   G V F ++ F +R  VSV+
Sbjct:   20 RLGVKKFGGEAIAAGNVIVRQRGTKFYPGEGVGMGKDHTLFATRDGQVAF-KTGFKRRTFVSVL 82          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig968.17783.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized6.930e-7494.08protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.760e-7392.11protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Ribosomal4.370e-2156.52protein L27 n=1 Tax=Blastocystis hominis TaxID=129... [more]
Uncharacterized1.150e-2074.60protein n=1 Tax=Aphanomyces euteiches TaxID=100861... [more]
50S1.450e-2080.77ribosomal protein L27 n=1 Tax=Kordiimonas sedimini... [more]
50S1.760e-2063.89ribosomal protein L27 n=3 Tax=termite gut metageno... [more]
50S1.860e-2063.64ribosomal protein L27 n=2 Tax=bacterium TaxID=1869... [more]
LSU2.110e-2066.67ribosomal protein L27p n=1 Tax=hydrothermal vent m... [more]
50S2.990e-2066.67ribosomal protein L27 n=9 Tax=root TaxID=1 RepID=E... [more]
50S3.730e-2067.19ribosomal protein L27 n=1 Tax=Alphaproteobacteria ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001684Ribosomal protein L27PRINTSPR00063RIBOSOMALL27coord: 90..114
score: 40.15
coord: 40..64
score: 56.15
coord: 65..89
score: 56.15
IPR001684Ribosomal protein L27PFAMPF01016Ribosomal_L27coord: 38..118
e-value: 5.1E-33
score: 112.9
IPR001684Ribosomal protein L27TIGRFAMTIGR00062TIGR00062coord: 38..118
e-value: 7.5E-33
score: 110.4
IPR001684Ribosomal protein L27PANTHERPTHR15893RIBOSOMAL PROTEIN L27coord: 24..141
IPR001684Ribosomal protein L27HAMAPMF_00539Ribosomal_L27coord: 37..121
score: 24.682
NoneNo IPR availableGENE3D2.40.50.1030coord: 42..138
e-value: 3.7E-29
score: 102.9
NoneNo IPR availablePRODOMPD003114coord: 64..118
e-value: 1.0E-12
score: 173.0
NoneNo IPR availableSUPERFAMILY110324Ribosomal L27 protein-likecoord: 38..118
IPR018261Ribosomal protein L27, conserved sitePROSITEPS00831RIBOSOMAL_L27coord: 70..84

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig968contigEcto-sp9_F_contig968:19562..21396 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig968.17783.1mRNA_Ecto-sp9_F_contig968.17783.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig968 18987..21396 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig968.17783.1 ID=prot_Ecto-sp9_F_contig968.17783.1|Name=mRNA_Ecto-sp9_F_contig968.17783.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=153bp
MFGVLTSVLARECRSVVTGRMAGALFAAGTTCVATRCASKAAGGNTTNGR
NSRGRRLGVKKFGGENVVAGNIIIRQRGTQFYPGKGVGMGKDHTLFAMYP
GFVVFSRSPFTKRRTVSVMKAKVDTEAVAALLAEEQAREARARAASGIYV
SM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001684Ribosomal_L27
IPR018261Ribosomal_L27_CS