prot_Ecto-sp9_F_contig9679.17778.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9679.17778.1
Unique Nameprot_Ecto-sp9_F_contig9679.17778.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length229
Homology
BLAST of mRNA_Ecto-sp9_F_contig9679.17778.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G622_ECTSI)

HSP 1 Score: 260 bits (665), Expect = 1.280e-82
Identity = 143/149 (95.97%), Postives = 145/149 (97.32%), Query Frame = 0
Query:   81 MHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDPRLMQGSSTILRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFADTTFWIVGRALLRAIDASLQNSRMRAME 229
            MHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTND RLMQ SST+LRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVF DTTFWI GRALLRAIDASLQNSRMRAM+
Sbjct:    1 MHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDARLMQASSTMLRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFTDTTFWIFGRALLRAIDASLQNSRMRAMK 149          
BLAST of mRNA_Ecto-sp9_F_contig9679.17778.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LCQ2_9PHAE)

HSP 1 Score: 247 bits (630), Expect = 5.750e-77
Identity = 135/149 (90.60%), Postives = 141/149 (94.63%), Query Frame = 0
Query:   81 MHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDPRLMQGSSTILRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFADTTFWIVGRALLRAIDASLQNSRMRAME 229
            MHVTAVANA +SLFYFLLVLLV+ARWHEISVLV+ILNQITVSVCGF TVRMWIYTND RLMQGS TILRIS+ LE+KNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIV ADT+FWI GRALLRAIDASLQNSR RAME
Sbjct:    1 MHVTAVANAAISLFYFLLVLLVEARWHEISVLVMILNQITVSVCGFSTVRMWIYTNDTRLMQGSITILRISAALEKKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVVADTSFWIFGRALLRAIDASLQNSRKRAME 149          
BLAST of mRNA_Ecto-sp9_F_contig9679.17778.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCB1_ECTSI)

HSP 1 Score: 160 bits (404), Expect = 9.190e-44
Identity = 91/222 (40.99%), Postives = 138/222 (62.16%), Query Frame = 0
Query:    8 CSCICEDDSWADHNILGSDSCVPIKAHVIFGSVGIVLSVAVLFQALYQLHLQLKFHAQQFSVSTMPAECCRKNMHVTAVANAVVSLFYFLLVLLVKAR--WHEISVLVVILNQITVSVCGFLTVRMWIYTNDPRLMQGSSTILRISSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVFADTTFWIVGRALLRAIDASLQNSRMRA 227
            C C C +++W+++NI+G  SCVP KAHV+FG+VG++++   L  + YQL+ Q+K H Q  + S    E CR+ +H+  + +AV+ L YF +VLL+ +   W   ++ ++   Q  +++ G LTVRMWIY NDPRL + +  IL IS  LE   G  +S  V+  GP +ATVLA+    +AA K+ AV F+ LIVF D      G ALLR ++  L+N+  R+
Sbjct:   25 CRCACGNETWSEYNIVGLPSCVPSKAHVVFGTVGVLMATTSLCHSAYQLYRQVKHHRQVITASISSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMS-TIFMLSAGQTMMTIGGILTVRMWIYCNDPRLTRETPEILAISEALERPTGCFVSNTVMCVGPAIATVLAVAKSLQAAGKVSAVAFLGLIVFCDFIILKSGTALLRTVNKYLRNTVERS 245          
BLAST of mRNA_Ecto-sp9_F_contig9679.17778.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KM92_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 6.240e-25
Identity = 57/133 (42.86%), Postives = 89/133 (66.92%), Query Frame = 0
Query:    3 DGGTSCSCICEDDSWADHNILGSDSCVPIKAHVIFGSVGIVLSVAVLFQALYQLHLQLKFHAQQFSVSTMPAECCRKNMHVTAVANAVVSLFYFLLVLLVKARWHEISVLVVI-LNQITVSVCGFLTVRMWIY 134
            DGG  C C C D++W+++NILG  SCVP KAH +FG+VG+ +++  L  A YQL+ Q+K+H Q  + ST   E CR+ +H+  + +AV+ L YF +VLL+ +    +S + +  + QI +++ G LTVRMW+Y
Sbjct:   22 DGG--CRCACGDETWSEYNILGLPSCVPSKAHAVFGAVGVFVTMTSLGHAAYQLYRQVKYHRQFMAASTSSVEKCRRWLHIVVIIHAVIGLCYFGMVLLLDSERLWMSTIFMFGIGQIMMTIGGILTVRMWLY 152          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9679.17778.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized1.280e-8295.97protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.750e-7790.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.190e-4440.99protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.240e-2542.86protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 209..229
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..102
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 103..108
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..34
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 162..180
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 181..188
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..161
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 109..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 189..208
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 55..80
NoneNo IPR availableTMHMMTMhelixcoord: 35..57
NoneNo IPR availableTMHMMTMhelixcoord: 162..181
NoneNo IPR availableTMHMMTMhelixcoord: 191..213
NoneNo IPR availableTMHMMTMhelixcoord: 80..102
NoneNo IPR availableTMHMMTMhelixcoord: 112..134

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9679contigEcto-sp9_F_contig9679:1494..5120 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9679.17778.1mRNA_Ecto-sp9_F_contig9679.17778.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9679 1494..5120 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9679.17778.1 ID=prot_Ecto-sp9_F_contig9679.17778.1|Name=mRNA_Ecto-sp9_F_contig9679.17778.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=229bp
MSDGGTSCSCICEDDSWADHNILGSDSCVPIKAHVIFGSVGIVLSVAVLF
QALYQLHLQLKFHAQQFSVSTMPAECCRKNMHVTAVANAVVSLFYFLLVL
LVKARWHEISVLVVILNQITVSVCGFLTVRMWIYTNDPRLMQGSSTILRI
SSVLEEKNGQRLSYLVLSTGPVVATVLALLGRTEAAAKLVAVTFIMLIVF
ADTTFWIVGRALLRAIDASLQNSRMRAME
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