prot_Ecto-sp9_F_contig9649.17755.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9649.17755.1
Unique Name	prot_Ecto-sp9_F_contig9649.17755.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	281

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9649.17755.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUP1_ECTSI)

HSP 1 Score: 482 bits (1241), Expect = 1.730e-168
Identity = 270/281 (96.09%), Postives = 274/281 (97.51%), Query Frame = 0

Query:    1 KTPAIRALPASRTPWFVRSVVPGKRAALKEEEEGKAAALAAATAAEEKSEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDGEGQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKEAMMTILTVCMLGTSSILEGMDATLDAQVK 281
            + P  RALPASR PWFVRSVVPGKR ALKEEEEGKAAALAAATAAEEK+EKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDG+GQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKE MMTILTVCMLGTSSILEGMDATLDAQ +
Sbjct:  143 RQPTRRALPASRAPWFVRSVVPGKRTALKEEEEGKAAALAAATAAEEKTEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKETMMTILTVCMLGTSSILEGMDATLDAQAE 423

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9649.17755.1 vs.
Match: WW (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K749_9PHAE)

HSP 1 Score: 424 bits (1091), Expect = 8.030e-138
Identity = 243/262 (92.75%), Postives = 249/262 (95.04%), Query Frame = 0

Query:   18 RSVVPGKRAALKEEEEGKAAALAAATAAEEKSEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDGEGQPRQQSSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKEAMMTILTVCMLGTSSILEGMDATLDAQ 279
            R V    RAALK+EEEGKAAALAAAT     +EKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSE KLRMAMEDIEVLDEGLKLFMDG+GQPRQQSSRAGPLSWRRVS+AYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKE MMTILTVCMLGTSSILEGM A+L+AQ
Sbjct:  667 RQVQAELRAALKKEEEGKAAALAAATXXXXXTEKAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLEELSALKESAVEAELRANSSETKLRMAMEDIEVLDEGLKLFMDGDGQPRQQSSRAGPLSWRRVSDAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNTALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQAKETMMTILTVCMLGTSSILEGMYASLEAQ 928

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9649.17755.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9649.17755.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	1.730e-168	96.09	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
WW	8.030e-138	92.75	domain-containing protein n=1 Tax=Ectocarpus sp. C...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 74..122
None	No IPR available	COILS	Coil	Coil	coord: 234..254

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9649	contig	Ecto-sp9_F_contig9649:343..4869 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9649.17755.1	mRNA_Ecto-sp9_F_contig9649.17755.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9649 343..4869 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9649.17755.1 ID=prot_Ecto-sp9_F_contig9649.17755.1|Name=mRNA_Ecto-sp9_F_contig9649.17755.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=281bp
KTPAIRALPASRTPWFVRSVVPGKRAALKEEEEGKAAALAAATAAEEKSE
KAEAFALRQAESAKENATAAGQWLVSLGLEREELKGQLAAAQTNSTSLLE
ELSALKESAVEAELRANSSEAKLRMAMEDIEVLDEGLKLFMDGEGQPRQQ
SSRAGPLSWRRVSEAYLRPLLPSKLKAPTPEELEALKLNRSLGRALENNT
ALAEAVSSKDDLVKELNSRIKQFQLHAVRRKKGYRALKLGLAELTNEVQA
KEAMMTILTVCMLGTSSILEGMDATLDAQVK