prot_Ecto-sp9_F_contig9632.17745.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9632.17745.1
Unique Nameprot_Ecto-sp9_F_contig9632.17745.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length152
Homology
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA98_9PHAE)

HSP 1 Score: 230 bits (586), Expect = 3.180e-73
Identity = 115/121 (95.04%), Postives = 118/121 (97.52%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            GRV+F+ VSFGYPTRSGVLVLD LSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLS+Y PADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH
Sbjct:   53 GRVDFNCVSFGYPTRSGVLVLDGLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSSYNPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 173          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: ATP-binding (cassette, sub-family B, member 8 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5Q1_ECTSI)

HSP 1 Score: 237 bits (605), Expect = 4.290e-72
Identity = 119/121 (98.35%), Postives = 120/121 (99.17%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            GRVEFDSVSFGYPTRSGVLVLD L+LTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH
Sbjct:  422 GRVEFDSVSFGYPTRSGVLVLDGLNLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 542          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HIK7_9STRA)

HSP 1 Score: 126 bits (316), Expect = 8.510e-31
Identity = 62/121 (51.24%), Postives = 86/121 (71.07%), Query Frame = 0
Query:   31 RVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGM--GSYSMEDVYKAAKSANI 149
            R+ F+ V F YPTR G  +L  L+L ++ GE V +VG SGGGKST+LRL+   YDP  G IL+G RD+++   A++S  ++ VTQEPQLFPIS+ ENIAYG+  G ++M+ V +AA  AN+
Sbjct:  457 RIRFEGVHFAYPTRKGQKILQGLNLDLKSGEVVGLVGGSGGGKSTVLRLLLHLYDPDEGRILIGDRDVASIPQAELSQRIAMVTQEPQLFPISIAENIAYGLPEGCWTMDQVKRAAVLANV 577          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVG1_9STRA)

HSP 1 Score: 126 bits (316), Expect = 9.180e-31
Identity = 64/121 (52.89%), Postives = 87/121 (71.90%), Query Frame = 0
Query:   32 VEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGM--GSYSMEDVYKAAKSANIH 150
            V F +VSF YP R    +L  L L + PG++VAVVG+SGGGKST+LRL+ R YD   GSI L GRDL T+   ++SN V+ ++QEP L PIS+++NIAYG+  G++S  DV  AA++ANI+
Sbjct:  508 VVFSNVSFTYPLRPHTPILSSLYLNIGPGQRVAVVGASGGGKSTLLRLLARHYDVDAGSIFLDGRDLLTFSQEELSNKVAMLSQEPPLLPISIKDNIAYGLKPGTFSQADVEAAARAANIY 628          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: LOW (QUALITY PROTEIN: ABC transporter B family member 1-like n=1 Tax=Rhincodon typus TaxID=259920 RepID=UPI0009A3793F)

HSP 1 Score: 119 bits (299), Expect = 1.340e-30
Identity = 64/121 (52.89%), Postives = 79/121 (65.29%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            GR+EF  VSF YPTR    VL +++  V PG  VA+VG SGGGKSTI+ LI RFYDP  G ILLGG DL +  P      +S V+QEP LF  S++ NI YG  + ++E+V  AAK AN H
Sbjct:   37 GRLEFQKVSFTYPTRQASQVLKEITFAVEPGNMVALVGPSGGGKSTIVNLIERFYDPDSGRILLGGCDLQSLDPQWFRQKISIVSQEPTLFATSIKNNITYGKEA-NIEEVVDAAKKANAH 156          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: ABC (transporter B family member 1-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EB00DD1)

HSP 1 Score: 122 bits (305), Expect = 3.400e-30
Identity = 67/122 (54.92%), Postives = 83/122 (68.03%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIHK 151
            G VEFD V F YP+R+   VL +LS  V  G+ VA+VG SGGGKSTI+ LI RFYDP  G ILLGG DL T  P+     ++ V+QEP LF  S+RENIAYG  + S ++V +AAK AN H+
Sbjct:  194 GEVEFDCVHFTYPSRADTPVLKELSFKVHTGQMVALVGPSGGGKSTIVSLIERFYDPDSGRILLGGHDLKTLDPSWFRRKMAMVSQEPTLFASSIRENIAYGKVA-SDQEVEEAAKQANAHE 314          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9KAF9_CALMI)

HSP 1 Score: 123 bits (309), Expect = 5.540e-30
Identity = 67/121 (55.37%), Postives = 81/121 (66.94%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            GR+EF  VSF YPT+    VL +++ TV PG  VA+VG SGGGKSTI+ LI RFYDP  G ILLGG DL T  P      +S V+QEP LF  S++ENI YG  + +ME+V  AAK AN H
Sbjct:  321 GRLEFQKVSFTYPTKQESQVLKEVTFTVSPGNMVALVGPSGGGKSTIVSLIERFYDPDSGRILLGGCDLQTLDPQWFRQKISVVSQEPTLFATSIKENITYGREA-NMEEVIDAAKKANAH 440          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: Efflux (ABC transporter permease/ATP-binding protein n=12 Tax=Myxococcus TaxID=32 RepID=L7U7N8_MYXSD)

HSP 1 Score: 123 bits (308), Expect = 7.440e-30
Identity = 62/121 (51.24%), Postives = 82/121 (67.77%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            G VEF +V F YPTRS V VL  + L +RPGE VAVVG SG GKST+  L+ RFYDPQGG++LL G+ L++ +P  +   +  V QEPQLF  S+ +NI Y     + E+V +AA++AN H
Sbjct:  345 GHVEFRAVRFAYPTRSDVPVLQGMDLEMRPGEVVAVVGPSGAGKSTLASLLSRFYDPQGGAVLLDGQPLTSLEPEWLRRNIGMVAQEPQLFSCSIADNIRYARPDATQEEVEEAARAANAH 465          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: Uncharacterized (protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3HJ69_CALMI)

HSP 1 Score: 123 bits (309), Expect = 8.160e-30
Identity = 67/121 (55.37%), Postives = 81/121 (66.94%), Query Frame = 0
Query:   30 GRVEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            GR+EF  VSF YPT+    VL +++ TV PG  VA+VG SGGGKSTI+ LI RFYDP  G ILLGG DL T  P      +S V+QEP LF  S++ENI YG  + +ME+V  AAK AN H
Sbjct:  516 GRLEFQKVSFTYPTKQESQVLKEVTFTVSPGNMVALVGPSGGGKSTIVSLIERFYDPDSGRILLGGCDLQTLDPQWFRQKISVVSQEPTLFATSIKENITYGREA-NMEEVIDAAKKANAH 635          
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Match: ABC (transporter domain-containing protein n=1 Tax=bacterium J17 TaxID=1932695 RepID=A0A202DV51_9BACT)

HSP 1 Score: 118 bits (295), Expect = 1.050e-29
Identity = 62/119 (52.10%), Postives = 84/119 (70.59%), Query Frame = 0
Query:   32 VEFDSVSFGYPTRSGVLVLDDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLSTYKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH 150
            ++F++VSF YP+R  + VLDD+S  V+ GE +A+VG SG GKSTI RLI RFYDPQ GSI  GG  L       +   ++ V+QEPQ+F IS++ENI YG  + S E++ +AAK+ANIH
Sbjct:   37 IKFENVSFTYPSRPELKVLDDVSFEVKAGETLALVGPSGSGKSTIARLIPRFYDPQSGSISFGGIPLPLLSLDSLRAQIAVVSQEPQVFSISLKENIRYGRITASDEEIEQAAKAANIH 155          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9632.17745.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
ABC3.180e-7395.04protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ATP-binding4.290e-7298.35cassette, sub-family B, member 8 n=1 Tax=Ectocarpu... [more]
Hypothetical8.510e-3151.24protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized9.180e-3152.89protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
LOW1.340e-3052.89QUALITY PROTEIN: ABC transporter B family member 1... [more]
ABC3.400e-3054.92transporter B family member 1-like n=1 Tax=Halioti... [more]
Uncharacterized5.540e-3055.37protein (Fragment) n=1 Tax=Callorhinchus milii Tax... [more]
Efflux7.440e-3051.24ABC transporter permease/ATP-binding protein n=12 ... [more]
Uncharacterized8.160e-3055.37protein n=1 Tax=Callorhinchus milii TaxID=7868 Rep... [more]
ABC1.050e-2952.10transporter domain-containing protein n=1 Tax=bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.50.300coord: 25..150
e-value: 2.1E-45
score: 156.9
NoneNo IPR availablePANTHERPTHR24222FAMILY NOT NAMEDcoord: 16..151
IPR003439ABC transporter-likePFAMPF00005ABC_trancoord: 50..148
e-value: 2.4E-20
score: 73.5
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 26..150

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9632contigEcto-sp9_F_contig9632:1826..3835 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9632.17745.1mRNA_Ecto-sp9_F_contig9632.17745.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9632 1826..3848 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9632.17745.1 ID=prot_Ecto-sp9_F_contig9632.17745.1|Name=mRNA_Ecto-sp9_F_contig9632.17745.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=152bp
MPSPHLQQQQQQQQQPTPAHAGSERQRQRGRVEFDSVSFGYPTRSGVLVL
DDLSLTVRPGEKVAVVGSSGGGKSTILRLICRFYDPQGGSILLGGRDLST
YKPADISNVVSWVTQEPQLFPISVRENIAYGMGSYSMEDVYKAAKSANIH
K*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003439ABC_transporter-like
IPR027417P-loop_NTPase