prot_Ecto-sp9_F_contig9631.17744.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9631.17744.1
Unique Nameprot_Ecto-sp9_F_contig9631.17744.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length435
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9631.17744.1 vs.
Match: Cellulose (synthase (UDP-forming), family GT2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIF6_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 9.600e-115
Identity = 246/265 (92.83%), Postives = 251/265 (94.72%), Query Frame = 0 
Query:   99 ELEKQGVTLKAASATLKGGKTADKSLFRRGSKRLSNEGVDDALNAKDLDEIKKAEHLKKKLKAHHSEARAVLAKKLQVESARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYRSPDFVRAMEAELGVMEISFSPTNARQRSMASLPMGAPDYDSKMALLQEQKAMEQXXXXXXXXXXXXXXXXRENKAAMEQDAADALAMANAANQRCLEEMQRQQDEKLXXXXXXXXXXXXXXXXEAELVRMRHKE 363
            ELEKQGV LKAASA LKGGKTADKSLFRRGSKRLSNEGVD ALNAK LDEIKKAEHLKKKLKAHH EARAVLAKKLQVE+ARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNY+SPDFVRAMEAE GVMEISFSPTNARQRSMASLP+GAPDYDSKMALLQEQKA+EQ  XXXXXXXXXXXXXX   KAAMEQDAADALAMANAANQR LEEMQRQQDE+ XXXXXXXXXXXXXXXXEAEL RMRHKE
Sbjct:    2 ELEKQGVALKAASAMLKGGKTADKSLFRRGSKRLSNEGVDGALNAKHLDEIKKAEHLKKKLKAHHDEARAVLAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYQSPDFVRAMEAESGVMEISFSPTNARQRSMASLPVGAPDYDSKMALLQEQKAIEQQQXXXXXXXXXXXXXXXXXKAAMEQDAADALAMANAANQRRLEEMQRQQDEEXXXXXXXXXXXXXXXXXEAELARMRHKE 266
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9631.17744.1 vs.
Match: GT2 (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRP7_9PHAE)

HSP 1 Score: 203 bits (517), Expect = 8.360e-61
Identity = 114/143 (79.72%), Postives = 119/143 (83.22%), Query Frame = 0 
Query:  114 LKGGKTADKSLFRRGSKRLSNEGVDDALNAKDLDEIKKAEHLKKKLKAHHSEARAVLAKKLQVESARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVAAPLNYRSPDFVRAMEAELGVMEISFSPTNARQR 256
            LKGGKTAD SLFRRGSKRLS+EGVDDALNAK L               HH EARA+LAKKLQVE+ARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIV APLNY+SPDFVRA EAELG + IS S TNARQR
Sbjct:    2 LKGGKTADNSLFRRGSKRLSSEGVDDALNAKHLXXXXXXXXXXXXXXXHHDEARAILAKKLQVENARTGRVIKTNLGKYANPKLAQGAKAAVLASVVEYLNGEEFVRIVTAPLNYQSPDFVRATEAELGAIGISLSLTNARQR 144
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9631.17744.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Cellulose9.600e-11592.83synthase (UDP-forming), family GT2 n=1 Tax=Ectocar... [more]
GT28.360e-6179.72protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 362..435
NoneNo IPR availableCOILSCoilCoilcoord: 303..356
NoneNo IPR availableCOILSCoilCoilcoord: 272..294

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9631contigEcto-sp9_F_contig9631:3..4482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9631.17744.1mRNA_Ecto-sp9_F_contig9631.17744.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9631 3..4482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9631.17744.1 ID=prot_Ecto-sp9_F_contig9631.17744.1|Name=mRNA_Ecto-sp9_F_contig9631.17744.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=435bp
DLLSPARKASSVRAAADGGGYTPTGAGGRRKRSSVRSPKGYNMGTSQRQA
VNISTLEGLQMFLDEKQKEVVKAHARRTNELEAMLAKEESYFGTLLDNEL
EKQGVTLKAASATLKGGKTADKSLFRRGSKRLSNEGVDDALNAKDLDEIK
KAEHLKKKLKAHHSEARAVLAKKLQVESARTGRVIKTNLGKYANPKLAQG
AKAAVLASVVEYLNGEEFVRIVAAPLNYRSPDFVRAMEAELGVMEISFSP
TNARQRSMASLPMGAPDYDSKMALLQEQKAMEQQQRMEEEALRRPEMLER
ENKAAMEQDAADALAMANAANQRCLEEMQRQQDEKLEEQRRQLDEHQEHL
RREAELVRMRHKEDLDLRRAEMERETEAVETRQAEAKRLQEEELEKQRQE
MRRKHEEDMERQRQELARHAEEVARHKAELAKHNE
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