prot_Ecto-sp9_F_contig9628.17741.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9628.17741.1
Unique Nameprot_Ecto-sp9_F_contig9628.17741.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length430
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9628.17741.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWV8_ECTSI)

HSP 1 Score: 553 bits (1424), Expect = 3.270e-193
Identity = 409/429 (95.34%), Postives = 416/429 (96.97%), Query Frame = 0 
Query:    1 AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQTSQEDGDRYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSSERTSYHASNGGGSSNGAGGIPAGVNAGRGGGEMMAHGGGHRQIPAPYGXXXGXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGGSGLVGXXXXXXXXXXXXXXXXXXXXXXVAHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRPKQALPAAXXXXXXXXXXXXSGFAPSSSATEGPVPAGXXXXSSGRSGGXSXXXXXXXXXXGFGESESEPGSVPSTFRG 429
            AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISA+DDEQNRLY+EEYGSQ SQEDG+RYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSS+RTSYHASNGGGSSNGAGGIPAGVNAGRGGGE++AHG GHRQIPAPYG   GXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGG     XXXXXXXXXXXXXXXXXXXXXXVAHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRP QALPAAXXXXXXXXXXXXSGFAPSSSAT+GPVPAGXXXXSSGRSGGX XXXXXXXXXX FGESESEPGSVPSTFRG
Sbjct:   47 AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISARDDEQNRLYNEEYGSQASQEDGERYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSSDRTSYHASNGGGSSNGAGGIPAGVNAGRGGGEIVAHGVGHRQIPAPYG---GXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXVAHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQERRPNQALPAAXXXXXXXXXXXXSGFAPSSSATKGPVPAGXXXXSSGRSGGXXXXXXXXXXXXXFGESESEPGSVPSTFRG 472
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9628.17741.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK61_9PHAE)

HSP 1 Score: 389 bits (999), Expect = 5.270e-131
Identity = 250/277 (90.25%), Postives = 252/277 (90.97%), Query Frame = 0 
Query:    1 AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQTSQEDGDRYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSQYPGPVPSHFGASQMSSERTSYHASNGGGSSNGAGGIPAGVNAGRGGGEMMAHGGGHRQIPAPYGXXXGXXXXXXXXXXXXXXXXXPTYNPNPYPHRSTSGVPRGHGLGGSGLVG 277
            AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQ SQEDG+RYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGS YPGPVPSHFGASQMSSERTSYHASNGGGSS+GAGGIPAGVNAGRG GEMMA GGGHRQIPAPYG   G                 PTYNPN YPHRSTSGVPRGHGLGGSGLVG
Sbjct:   47 AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGVGRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQASQEDGERYDALGDSPGAQGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQRSRASGSIYGHSQYGDGSSLGGSHYPGPVPSHFGASQMSSERTSYHASNGGGSSSGAGGIPAGVNAGRGRGEMMAPGGGHRQIPAPYG---GGGDGTPAAGGAARMLPPPTYNPNLYPHRSTSGVPRGHGLGGSGLVG 320
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9628.17741.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.270e-19395.34protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.270e-13190.25protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 131... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9628contigEcto-sp9_F_contig9628:774..4482 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9628.17741.1mRNA_Ecto-sp9_F_contig9628.17741.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9628 774..4482 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9628.17741.1 ID=prot_Ecto-sp9_F_contig9628.17741.1|Name=mRNA_Ecto-sp9_F_contig9628.17741.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=430bp
AGRFIDKIEVSTPGAMTRVKSGTIGQSVKRSASHDKSDSHGFHSNASRGV
GRSGVKMLEGVQELDGISAQDDEQNRLYHEEYGSQTSQEDGDRYDALGDS
PGAQGPSSQGPRSPSVYSHFSQSVFSQSAYGPSAYGPSQRSRASGSIYGH
SQYGDGSSLGGSQYPGPVPSHFGASQMSSERTSYHASNGGGSSNGAGGIP
AGVNAGRGGGEMMAHGGGHRQIPAPYGGGDGTAAAAAAAGGAARMLPPPT
YNPNPYPHRSTSGVPRGHGLGGSGLVGGGGGGAAATAAAAAAAAATAAAV
AHEASGFNLGSPPPYSQAASTLPKEPRPSVDSRPSLDGPQAWTTVDGQER
RPKQALPAAAAAAAARGGSAASGFAPSSSATEGPVPAGAAPASSGRSGGG
SGSVSAPGPSSGFGESESEPGSVPSTFRG*
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