prot_Ecto-sp9_F_contig962.17736.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig962.17736.1
Unique Nameprot_Ecto-sp9_F_contig962.17736.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length289
Homology
BLAST of mRNA_Ecto-sp9_F_contig962.17736.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LG21_ECTSI)

HSP 1 Score: 530 bits (1366), Expect = 1.140e-189
Identity = 282/288 (97.92%), Postives = 284/288 (98.61%), Query Frame = 0
Query:    1 MGGGSRQNQRSNRTRARTAGPAVTCGAAGXXXXXXXXXXXXXXXXXXXXAAAGHASGIVGVGVKMKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYELLSESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKILPGFNLDTRKPLAENTKSSTAAMYSPKIASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKYGGPTGPKFSFGASRRDRWGNMRMPTIA 288
            MGGGSRQNQRSNRTRARTAGPA TCGAA XXXXXXXXXXXXXXXXXXXXAAAGHASG  GVGVKMKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYE+LSESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKILPGFNLDTRKPLAENTKSSTAAMYSPK+ASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKYGGPTGPKFSFGASRRDRWGNMRMPTIA
Sbjct:    1 MGGGSRQNQRSNRTRARTAGPAATCGAAXXXXXXXXXXXXXXXXXXXXXAAAGHASGTGGVGVKMKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYEVLSESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKILPGFNLDTRKPLAENTKSSTAAMYSPKLASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKYGGPTGPKFSFGASRRDRWGNMRMPTIA 288          
BLAST of mRNA_Ecto-sp9_F_contig962.17736.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JC23_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 3.460e-162
Identity = 219/224 (97.77%), Postives = 220/224 (98.21%), Query Frame = 0
Query:   65 MKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYELLSESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKILPGFNLDTRKPLAENTKSSTAAMYSPKIASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKYGGPTGPKFSFGASRRDRWGNMRMPTIA 288
            MKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYELLSESPSRRDITFGTAARESM LMTASPGVLYNVDGVFRNGPVKGKILPGFNLD RKPLAENTKSST AMYSPK+ASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKYGGPTGPKFSFGASR DRWGNMRMPTIA
Sbjct:    1 MKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAMYTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYELLSESPSRRDITFGTAARESMHLMTASPGVLYNVDGVFRNGPVKGKILPGFNLDKRKPLAENTKSSTGAMYSPKLASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKYGGPTGPKFSFGASRTDRWGNMRMPTIA 224          
BLAST of mRNA_Ecto-sp9_F_contig962.17736.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYR1_9STRA)

HSP 1 Score: 121 bits (304), Expect = 4.120e-29
Identity = 91/238 (38.24%), Postives = 118/238 (49.58%), Query Frame = 0
Query:   67 KSDVRFGNKEGGGTNFG-SEERFAWQKCKYASDAMYTIPDVKAPPFS-FGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYELLSESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKILPGFNLDTRKPLAENTKSSTAAMYSP-----KIASKGGAVWFGEKEQERFQGTIEGIGRRSPGPVYDVAKY--GGPT-------GPKFSFGASRR-DRWGNMRMPTI 287
            K D R  NK G        EER  WQ+    +DA+Y +PD ++   + FGTSTR+DW+  M++ +DLYNP + P NY       L +  PS   I FG ++R        +PG  YN+DG++ NGP  G++  GF    RK L     S+T A Y P     K A   G  +FG KE++           RSPGPVYD AKY  G P        G  FSFGA R  DR+     P I
Sbjct:   64 KQDQRIPNKTGHVAFIDVGEERMKWQRTVSETDALYQLPDTRSRCGTPFGTSTRSDWENTMKSKRDLYNPYASPGNYNPPLNVTLRAP-PS---IKFGYSSRLERYGRNKTPGPDYNIDGIYSNGPTCGRVKLGFAKSKRKDLIV---SATDASYFPRFPKGKSAPLTGRNFFGLKEEQS----------RSPGPVYDTAKYDFGKPAANVIGFPGGHFSFGAGRNFDRFKLRDQPMI 284          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig962.17736.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized1.140e-18997.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized3.460e-16297.77protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical4.120e-2938.24protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig962contigEcto-sp9_F_contig962:15468..19109 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig962.17736.1mRNA_Ecto-sp9_F_contig962.17736.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig962 15190..19367 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig962.17736.1 ID=prot_Ecto-sp9_F_contig962.17736.1|Name=mRNA_Ecto-sp9_F_contig962.17736.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=289bp
MGGGSRQNQRSNRTRARTAGPAVTCGAAGGRRTSGGGGLRKPATTRDSSA
AAGHASGIVGVGVKMKKSDVRFGNKEGGGTNFGSEERFAWQKCKYASDAM
YTIPDVKAPPFSFGTSTRADWKKIMENTKDLYNPNSGPANYKTGNEYELL
SESPSRRDITFGTAARESMDLMTASPGVLYNVDGVFRNGPVKGKILPGFN
LDTRKPLAENTKSSTAAMYSPKIASKGGAVWFGEKEQERFQGTIEGIGRR
SPGPVYDVAKYGGPTGPKFSFGASRRDRWGNMRMPTIA*
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