prot_Ecto-sp9_F_contig9611.17729.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9611.17729.1
Unique Nameprot_Ecto-sp9_F_contig9611.17729.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length272
Homology
BLAST of mRNA_Ecto-sp9_F_contig9611.17729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4Y4_ECTSI)

HSP 1 Score: 303 bits (777), Expect = 1.960e-97
Identity = 222/300 (74.00%), Postives = 228/300 (76.00%), Query Frame = 0
Query:    1 PLAGRRGGAFGALTTVEARLLPGLPRGHTLKVEHPPKTSSGGFSLGREPKRQEVQS-FLKTNSGGKTVNALPFRRIPPQAKPATPTVAIPASSVTVATPP-VAVTTGTEETPTHGTVSAYVTAAAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG---------------------------AHDGPEFSPTNETSAACTVMSIPDFPEYEEQRAAQEAQIRRNRPATKTDPPLPATTVGNTRSTSTAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEEDGWG 271
            PLAGRRGGAFGALTTVEAR LPGL RG  LKVEHPP  SSGGFS+G E  RQEV+S FLKT SGGKTV+ALPF RIPPQ KPATPTVAIPA+SVT A    V V TGTEE P HGT S          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                            +HDG  FS  N+TS ACTVMSIPD PEYEEQRAAQEAQI RNRPATKTDP  P TTVGNTRSTSTAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEE GWG
Sbjct:  204 PLAGRRGGAFGALTTVEARPLPGLTRGDPLKVEHPPNGSSGGFSVGSEATRQEVKSSFLKTTSGGKTVDALPFLRIPPQEKPATPTVAIPAASVTAAXXXAVPVPTGTEENPIHGTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAVSHDGAGFSSANQTSVACTVMSIPDLPEYEEQRAAQEAQIHRNRPATKTDPSPPDTTVGNTRSTSTAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEEHGWG 503          
BLAST of mRNA_Ecto-sp9_F_contig9611.17729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV6_ECTSI)

HSP 1 Score: 305 bits (782), Expect = 2.490e-92
Identity = 225/326 (69.02%), Postives = 230/326 (70.55%), Query Frame = 0
Query:    1 PLAGRRGGAFGALTTVEARLLPGLPRGHTLKVEHPPKTSSGGFSLGREPKRQEVQSFLKTNSGGKTVNALPFRRIPPQAKPATPTVAIPASSVTVATPP-VAVTTGTEETPTHGTVSAYVTAAAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG------------------------------------------------------AHDGPEFSPTNETSAACTVMSIPDFPEYEEQRAAQEAQIRRNRPATKTDPPLPATTVGNTRSTSTAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEEDGWG 271
            PLAGRRGGAFGALTTVEAR LPGL RG  LKVEHPPK SSGGFS+GRE  RQE QSFLKTNSGGKTV+ALPF RIPPQ KPATPTVAIPA+SVT A    V V TGTEE P HGT S          XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                                                       + DG EFS  N+T  ACTVMSIPD PEYEEQRAAQEAQIRRNRPATKTDPP P TTVGNT S STAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEEDGWG
Sbjct:  894 PLAGRRGGAFGALTTVEARPLPGLTRGDPLKVEHPPKGSSGGFSVGREATRQEAQSFLKTNSGGKTVDALPFLRIPPQEKPATPTVAIPAASVTAAXXXAVPVPTGTEENPIHGTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIEAVSQDGAEFSSANQTFVACTVMSIPDLPEYEEQRAAQEAQIRRNRPATKTDPPAPDTTVGNTPSASTAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEEDGWG 1219          
BLAST of mRNA_Ecto-sp9_F_contig9611.17729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ18_9PHAE)

HSP 1 Score: 179 bits (454), Expect = 1.890e-47
Identity = 164/339 (48.38%), Postives = 171/339 (50.44%), Query Frame = 0
Query:   14 TTVEARLLPGLPRGHTLKVEHPPKTSSGGFSLGREPKRQEVQS-FLKTNSGGKTVNALPF--------------RRIPPQAKPATPTVAIPASSVTVATPPVAVTTGTEETPTHGTVSAYVTAAAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GAHDGPEFSPTNETSAACTVMSIPDFP------------------------------------------------------------------EYEEQRAAQEAQIRRNRPATKTDPPLPATTVGNTRSTSTAAPVTPKTEQPFERVKQGKWRVLTADYLSTDSEDGSGEEDG 269
            TTVEAR LPGL RG                    +  RQE QS F+K  SGGKT+NALPF              R     AKPATPTVAI A+S+TVA   V V TG EE   HGT S          XXXXXXXXXXXXXXXXXXXX                  GAHDG  FS TN+TS ACTVMSIPD P                                                                  EYEEQRAAQEAQI RNR A KT PP P TTV NTR  ST APVTPKTEQPFERVKQGKWRVLTADYLSTDS+DGSGEE G
Sbjct:  814 TTVEARPLPGLTRGDM------------------DATRQETQSSFVKPTSGGKTINALPFLPIXXXXXXXXXXXRAFGALAKPATPTVAITAASITVAASAVPVPTGAEEGSNHGTDSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAAAAATVPVTTTGTEGGAHDGAGFSRTNQTSVACTVMSIPDLPVRLPAEATWRRILATNHHYVADTPQFTLTSTLPDKDFRSLAFDSAIVLVYFIANTCSRDLGSRTRQEYEEQRAAQEAQILRNRRAIKTAPPPPGTTVDNTRLASTVAPVTPKTEQPFERVKQGKWRVLTADYLSTDSDDGSGEEVG 1134          
BLAST of mRNA_Ecto-sp9_F_contig9611.17729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J926_9PHAE)

HSP 1 Score: 156 bits (395), Expect = 1.240e-39
Identity = 123/274 (44.89%), Postives = 139/274 (50.73%), Query Frame = 0
Query:   14 TTVEARLLPGLPRGHTLKVEHPPKTSSGGFSLGREPKRQEVQSFL--KTNSGGKTVNALPFRRIPPQAKPATPTVAIPASSVTVATPPVAVTTGTEETPTHGTVSAYVTAAAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAHDGPEFSPTNETSAACT----------------------------VMSIPDFP----------EYEEQRAAQEAQIRRNRPATKTDPPLPATTVGNTRSTSTAAPVTPKTEQPFERVKQGK 247
            TTVEAR LP L RG T KVEHPPK+SSG FS+G +  R E QS L   T+ GGKTVNALPF  IPP        +A   +  + A  P+           HGTV+A +TAAA+A                                     GA+DG  FSPTN+TS ACT                            V SI +            EYEE  AAQEAQI RNRPATKT PP P TTVG+TRS+ST APVTPKTEQPFERVKQGK
Sbjct:  641 TTVEARPLPDLTRGETFKVEHPPKSSSGEFSMGSDATRHETQSSLVKPTSGGGKTVNALPFLPIPPVGP-----LAGRRAGASGALDPI-----------HGTVAA-ITAAASAVPVAAGIDE----------------------------GANDGAGFSPTNKTSVACTADTPQLKFTSTRPDKDFRSRALDSTFVLVYSIANTQPRDLGSRSRQEYEELFAAQEAQILRNRPATKTAPPPPDTTVGDTRSSSTDAPVTPKTEQPFERVKQGK 869          
BLAST of mRNA_Ecto-sp9_F_contig9611.17729.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4X7_ECTSI)

HSP 1 Score: 53.1 bits (126), Expect = 5.210e-5
Identity = 31/51 (60.78%), Postives = 34/51 (66.67%), Query Frame = 0
Query:    2 LAGRRGGAFGALTTVEARLLPGLPRGHT-LKVEHPPKTSSGGFSLGREPKR 51
            L G R G  GAL    A +LP + + H   KVEHPPKTSSGGFSLGREP R
Sbjct:   50 LGGGRAGELGAL----AGVLPAMTQDHRESKVEHPPKTSSGGFSLGREPTR 96          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9611.17729.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized1.960e-9774.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.490e-9269.02protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.890e-4748.38protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.240e-3944.89protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.210e-560.78protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9611contigEcto-sp9_F_contig9611:1..2184 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9611.17729.1mRNA_Ecto-sp9_F_contig9611.17729.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9611 1..2184 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9611.17729.1 ID=prot_Ecto-sp9_F_contig9611.17729.1|Name=mRNA_Ecto-sp9_F_contig9611.17729.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=272bp
PLAGRRGGAFGALTTVEARLLPGLPRGHTLKVEHPPKTSSGGFSLGREPK
RQEVQSFLKTNSGGKTVNALPFRRIPPQAKPATPTVAIPASSVTVATPPV
AVTTGTEETPTHGTVSAYVTAAAAATVSVATGAEEDPTHGTGSASVTAAA
SAVPVTTTGIEEGAHDGPEFSPTNETSAACTVMSIPDFPEYEEQRAAQEA
QIRRNRPATKTDPPLPATTVGNTRSTSTAAPVTPKTEQPFERVKQGKWRV
LTADYLSTDSEDGSGEEDGWG*
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