prot_Ecto-sp9_F_contig9602.17719.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9602.17719.1
Unique Nameprot_Ecto-sp9_F_contig9602.17719.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length328
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9602.17719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B9_9PHAE)

HSP 1 Score: 260 bits (664), Expect = 7.880e-78
Identity = 252/268 (94.03%), Postives = 254/268 (94.78%), Query Frame = 0 
Query:    1 MFLSSPHPAHGGGGGQRRPRDIRLRALDPDHFTCPPPAHGESHHRRAGASPAEGHASVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAVAARXXXXXXXXXXXXXXXXXXVASDEGSAVPEIREMYHLDAPSLRQFEEAAAAAXXXXXXXXXXXXXXXXXXXXXXXXRAPAACASAGRLPLPATVGVGSLLLPVARGGCSGGEGGMVKAIAEVRDTFRGLVVAAAALGVAVPCSPEGA 268
            MFLSSPH A GGGGGQRRPRDIRLRALDPDHFTCPPPAHGESHHRRAGASPAEGHASVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX     XXXXXXXXXXXXXXXX  VASDEGSAVPE+R MYHLDAPSL+ FEEAAAAA  XXXXXXXXXXXXXXXXXXXXXXRAPAACASAGRLPLPATVGVGSLLLPVARGG SGGEGGMVKAIAEVRDTFRGLVVAAAALGVAVPCSPEGA
Sbjct:  325 MFLSSPHLARGGGGGQRRPRDIRLRALDPDHFTCPPPAHGESHHRRAGASPAEGHASVLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXS-VASDEGSAVPEVRGMYHLDAPSLQHFEEAAAAATRXXXXXXXXXXXXXXXXXXXXXXRAPAACASAGRLPLPATVGVGSLLLPVARGGYSGGEGGMVKAIAEVRDTFRGLVVAAAALGVAVPCSPEGA 591
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BLAST of mRNA_Ecto-sp9_F_contig9602.17719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMU5_ECTSI)

HSP 1 Score: 176 bits (445), Expect = 1.110e-47
Identity = 121/129 (93.80%), Postives = 121/129 (93.80%), Query Frame = 0 
Query:  141 VASDEGSAVPEIREMYHLDAPSLRQFEEAAAAAXXXXXXXXXXXXXXXXXXXXXXXX-RAPAACASAGRLPLPATVGVGSLLLPVARGGCSGGEGGMVKAIAEVRDTFRGLVVAAAALGVAVPCSPEGA 268
            VASDEGSAVPEIREMYHLDAPSLRQFEEAAAAA    XXXXXXXXXXXXXXXXXXXX RAPAACASAGRLPLPATVGVGSLLLPVARGGCSGGE G VKAIAEVRDTF GLVVAAAALGVAVPCSPEGA
Sbjct:   56 VASDEGSAVPEIREMYHLDAPSLRQFEEAAAAATRALXXXXXXXXXXXXXXXXXXXXXRAPAACASAGRLPLPATVGVGSLLLPVARGGCSGGEAGTVKAIAEVRDTFSGLVVAAAALGVAVPCSPEGA 184
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9602.17719.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD57_9PHAE)

HSP 1 Score: 166 bits (420), Expect = 7.710e-47
Identity = 117/126 (92.86%), Postives = 119/126 (94.44%), Query Frame = 0 
Query:  143 SDEGSAVPEIREMYHLDAPSLRQFEEAAAAAXXXXXXXXXXXXXXXXXXXXXXXXRAPAACASAGRLPLPATVGVGSLLLPVARGGCSGGEGGMVKAIAEVRDTFRGLVVAAAALGVAVPCSPEGA 268
            SDEGSAVPEIR MYHLDAPSL+  EEAAA  XXXXXXXXXXXXXXXXXXXXXXXXRAPAACA AGRLPLPATVGVGSLL+PVARGGCSGGEGGMVKAIAE RDTFRGLVVAAAALGVAVPCSPEGA
Sbjct:   59 SDEGSAVPEIRGMYHLDAPSLQHLEEAAAXXXXXXXXXXXXXXXXXXXXXXXXXXRAPAACALAGRLPLPATVGVGSLLIPVARGGCSGGEGGMVKAIAEGRDTFRGLVVAAAALGVAVPCSPEGA 184
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9602.17719.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized7.880e-7894.03protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.110e-4793.80protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized7.710e-4792.86protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9602contigEcto-sp9_F_contig9602:2909..4440 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9602.17719.1mRNA_Ecto-sp9_F_contig9602.17719.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9602 581..4690 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9602.17719.1 ID=prot_Ecto-sp9_F_contig9602.17719.1|Name=mRNA_Ecto-sp9_F_contig9602.17719.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=328bp
MFLSSPHPAHGGGGGQRRPRDIRLRALDPDHFTCPPPAHGESHHRRAGAS
PAEGHASVLLADDGGGGGGGGREGGGTSPYSSAALSLSGPSRTPPGGASG
GGGACSRAGARAAGGGGAVAARAAEAATAAAAEAASAAASVASDEGSAVP
EIREMYHLDAPSLRQFEEAAAAATRALEALLVGVAGGDGGDGGGGGGRAP
AACASAGRLPLPATVGVGSLLLPVARGGCSGGEGGMVKAIAEVRDTFRGL
VVAAAALGVAVPCSPEGADYGLVNNTASSSSPTTTTTTTTTTTTTTTTTT
TTTTHPVPFTPRRHLLALYPHRYRPTH*
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