prot_Ecto-sp9_F_contig960.17717.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig960.17717.1
Unique Name	prot_Ecto-sp9_F_contig960.17717.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	251

Homology

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BLAST of mRNA_Ecto-sp9_F_contig960.17717.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5Q9_9PHAE)

HSP 1 Score: 233 bits (593), Expect = 2.970e-69
Identity = 207/250 (82.80%), Postives = 211/250 (84.40%), Query Frame = 0

Query:    1 MEKERPTHGFEDNSHRSLPTVDPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQWAVQQEQQGQXXXXXXXXXXXXXXXXXXXXXXYMXXQLERSEDXXXXXXQNGNADALEAADNVDDDMFRPADAEEDAERTKAKMDQCEAWVRQKQEALARFRRDCEAEVKRIKAVMEEHVGQLELKLKGEIQVSLDGIVEAKIEHNHRDKSRARKAHQILSSFSAAPLVSKMRRFD 250
            MEKERPTHGFEDNSH SLPTVDPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        WAVQ   QG XXXXXXXXXX    XX      YMXX       XXXXXX   NADALEAAD VD+DMF+ ADAEEDAER KAKMDQCEA VRQKQEALARFRRDCEAEV+RIKAVMEEHV QLELKLKGEIQVSLDG V+AKIEHNHRDKSRARKAHQILSSFSAAPLVSKMRRFD
Sbjct:  292 MEKERPTHGFEDNSHSSLPTVDPEQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------WAVQXXXQGXXXXXXXXXXXERQRXXQ-----YMXXXXXXXXXXXXXXXXXXNADALEAADTVDNDMFQLADAEEDAERNKAKMDQCEALVRQKQEALARFRRDCEAEVERIKAVMEEHVAQLELKLKGEIQVSLDGTVKAKIEHNHRDKSRARKAHQILSSFSAAPLVSKMRRFD 528

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BLAST of mRNA_Ecto-sp9_F_contig960.17717.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FM03_ECTSI)

HSP 1 Score: 186 bits (472), Expect = 4.430e-56
Identity = 100/117 (85.47%), Postives = 103/117 (88.03%), Query Frame = 0

Query:  108 MXXQLERSEDXXXXXXQNGNADALEAADNVDDDMFRPADAEEDAERTKAKMDQCEAWVRQKQEALARFRRDCEAEVKRIKAVMEEHVGQLELKLKGEIQVSLDGIVEAKIEHNHRDK 224
            M   LERSED      +NG ADALEAADNVDDD F+  DAEEDAERTKAKMDQCEAWVRQKQEALARFRRDCEAEVKRIKAVMEEHVGQLELKLKGE+QVSLDG VEAKIEHNHRDK
Sbjct:    1 MEDPLERSEDEEQQHEENGTADALEAADNVDDDRFQLVDAEEDAERTKAKMDQCEAWVRQKQEALARFRRDCEAEVKRIKAVMEEHVGQLELKLKGEMQVSLDGFVEAKIEHNHRDK 117

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig960.17717.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig960.17717.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	2.970e-69	82.80	protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=...	[more]
Uncharacterized	4.430e-56	85.47	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 24..65
None	No IPR available	COILS	Coil	Coil	coord: 77..125

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig960	contig	Ecto-sp9_F_contig960:14972..19145 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig960.17717.1	mRNA_Ecto-sp9_F_contig960.17717.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig960 14136..19246 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig960.17717.1 ID=prot_Ecto-sp9_F_contig960.17717.1|Name=mRNA_Ecto-sp9_F_contig960.17717.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=251bp
MEKERPTHGFEDNSHRSLPTVDPEQQQQQQQEQQEQEQEQEEEHQQQLQQ
QHQQHEQYYQRQQQQWQQHHHHHQWAVQQEQQGQEQQREEQQREEQQREE
RQREEQYMEDQLERSEDEEQQHEQNGNADALEAADNVDDDMFRPADAEED
AERTKAKMDQCEAWVRQKQEALARFRRDCEAEVKRIKAVMEEHVGQLELK
LKGEIQVSLDGIVEAKIEHNHRDKSRARKAHQILSSFSAAPLVSKMRRFD
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