prot_Ecto-sp9_F_contig9595.17711.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9595.17711.1
Unique Nameprot_Ecto-sp9_F_contig9595.17711.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length400
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9595.17711.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXU8_9PHAE)

HSP 1 Score: 664 bits (1713), Expect = 7.920e-239
Identity = 365/399 (91.48%), Postives = 375/399 (93.98%), Query Frame = 0 
Query:    1 MVSSRILAVVCGLDLLHGVSAWLPSPLRVPTSTTTGQRRAVRNIVAGEHHDVRQQWAALRSVADGEGGEGAGRPDLASMKRSFEGTMDNKLIMKYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISGRPISGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGAAXXXXXXDPKDAQAKAXXXXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVLMEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDTIVKAGGDGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 399
            MVSSR LAVVCG+DLLHGVSAWLPSPLRV TST T QR AVR+IVAGEH DVRQQW+ALRSVADGEG  GAGRPDLASMKRSFEGTMDNKLIM+YV ELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKD GKSHYCAMLPGHWIAASTIVPNVPFVYGDGEK+TNRSPSSRGAGPTCTLGELVSSISGRP++GG+LEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAG  XXXXXX         XXXXXXXXXXXXXXXXXXXXGAGVR EGFGRVADVVL EDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGD IVKAGG+GGDGGRDLYEFFLDQNMLIVAWKD+PKKEDAVVFVRDEVPR
Sbjct:    1 MVSSRTLAVVCGVDLLHGVSAWLPSPLRVSTSTATDQRWAVRDIVAGEHRDVRQQWSALRSVADGEGDGGAGRPDLASMKRSFEGTMDNKLIMEYVTELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDQGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKSTNRSPSSRGAGPTCTLGELVSSISGRPVTGGQLEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAGVRTEGFGRVADVVLTEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDSPKKEDAVVFVRDEVPR 399
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9595.17711.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1F7_ECTSI)

HSP 1 Score: 537 bits (1384), Expect = 4.390e-190
Identity = 301/315 (95.56%), Postives = 304/315 (96.51%), Query Frame = 0 
Query:   87 MDNKLIMKYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISGRPISGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGAAXXXXXXDP--KDAQAKAXXXXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVLMEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGDTIVKAGGDGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 399
            MDNKLIM+YVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISGRP+SGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAG  XXXXXX    KDAQAKA  XXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVL EDGAVRGRGKWGV GGYHLRWEFNTMNLDLGGD IVKAGG+GGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR
Sbjct:    1 MDNKLIMEYVMELRSRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCAMLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSISGRPVSGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAEAQPVKATGSAAGXXXXXXXXXXXXKDAQAKALAXXXXXXXXXXXXXXXXXXGAGVRAEGFGRVADVVLTEDGAVRGRGKWGVTGGYHLRWEFNTMNLDLGGDKIVKAGGEGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR 315
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9595.17711.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized7.920e-23991.48protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized4.390e-19095.56protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 22..399
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..21
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 17..21
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.718

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9595contigEcto-sp9_F_contig9595:423..3612 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9595.17711.1mRNA_Ecto-sp9_F_contig9595.17711.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9595 381..4289 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9595.17711.1 ID=prot_Ecto-sp9_F_contig9595.17711.1|Name=mRNA_Ecto-sp9_F_contig9595.17711.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=400bp
MVSSRILAVVCGLDLLHGVSAWLPSPLRVPTSTTTGQRRAVRNIVAGEHH
DVRQQWAALRSVADGEGGEGAGRPDLASMKRSFEGTMDNKLIMKYVMELR
SRKALLLSSLEETGGVITDDIYPIMEELALVNPSSGCGVGKDLGKSHYCA
MLPGHWIAASTIVPNVPFVYGDGEKATNRSPSSRGAGPTCTLGELVSSIS
GRPISGGELEYNADTPVRPLRARISALTNTVKDGEMPTVVAVAGFSPAAE
AQPVKATGSAAGAAAEGGGEDPKDAQAKALAAAMMEAAAREPRAAAAAGG
AGVRAEGFGRVADVVLMEDGAVRGRGKWGVRGGYHLRWEFNTMNLDLGGD
TIVKAGGDGGDGGRDLYEFFLDQNMLIVAWKDAPKKEDAVVFVRDEVPR*
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