prot_Ecto-sp9_F_contig9592.17709.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9592.17709.1
Unique Nameprot_Ecto-sp9_F_contig9592.17709.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length148
Homology
BLAST of mRNA_Ecto-sp9_F_contig9592.17709.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWS2_9PHAE)

HSP 1 Score: 253 bits (646), Expect = 2.560e-83
Identity = 122/143 (85.31%), Postives = 128/143 (89.51%), Query Frame = 0
Query:    1 ARGCAVLSIVIHVISFFLGGDFFVWQRRACFTAFVIGGLLLCVYERYMYVIGSVGFALCAVFDVLAVLRWITLDDEIFDSDDDYYTIFQXXXXQSEESSDNTILLWLAVPSFLGAIAMGLGAIFTFTAVSVWKYGGGTAIPHV 143
            ARGCA+LSIVIH ISF+LGG FFVWQR ACF AFV+GGLLLC YERYMYVIGS+GFALCAVFDVLAVLRWIT DDEIFDSDDDY T FQ    QSEESSD+TILLWLAVP FLGAIAMGLGAIFTFTA+  WKYGGGTAIPHV
Sbjct:   39 ARGCAILSIVIHAISFYLGGGFFVWQRNACFIAFVMGGLLLCFYERYMYVIGSLGFALCAVFDVLAVLRWITRDDEIFDSDDDYNTTFQVDDTQSEESSDSTILLWLAVPPFLGAIAMGLGAIFTFTAIFAWKYGGGTAIPHV 181          
BLAST of mRNA_Ecto-sp9_F_contig9592.17709.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8_ECTSI)

HSP 1 Score: 159 bits (401), Expect = 6.780e-47
Identity = 78/142 (54.93%), Postives = 97/142 (68.31%), Query Frame = 0
Query:    1 ARGCAVLSIVIHVISFFLGGDFFVWQRRACFTAFVIGGLLLCVYERYMYVIGSVGFALCAVFDVLAVLRWITLDDEIFDSDDDYYTIFQXXXXQSEESSDNTILLWLAVPSFLGAIAMGLGAIFTFTAVSVWKYGGGTAIPH 142
            AR C  LSIVIH IS F+ G ++ WQR A F  F +GGL+LC+Y++YMY IG VGFA+CA+FD+ AVLRWIT DD I + DD +           + SS+ T  LW A+P  LGAI MGLGAIF+FTAV  W+ G  TA+PH
Sbjct:   14 ARLCIALSIVIHTISLFVEGWYWPWQRNAAFGVFAVGGLVLCIYDQYMYAIGGVGFAVCALFDLFAVLRWITDDDNIVEGDDSF-----------DGSSEGTTALWYALPPLLGAITMGLGAIFSFTAVFFWEDGDCTAMPH 144          
BLAST of mRNA_Ecto-sp9_F_contig9592.17709.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAL4_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 5.070e-27
Identity = 58/142 (40.85%), Postives = 89/142 (62.68%), Query Frame = 0
Query:    1 ARGCAVLSIVIHVISFFLGGDFFVWQRRACFTAFVIGGLLLCVYERYMYVIGSVGFALCAVFDVLAVLRWITLDDEIFDSDDDYYTIFQXXXX---QSEESSDNTILLWLAVPSFLGAIAMGLGAIFTFTAVSVWKYGGGTA 139
            AR CA+ +I++HV +  + G  +VWQ  A   AF++ G+LLC+Y+R  Y+ G + FA+ AVFD+L ++ WI + + +    DDYY    XXXX     E      ++LW A+  FLGA+++GLGA+F+FT++  WK  G  A
Sbjct:    9 ARACAICAIIVHVGALLVFGWLWVWQWIASVLAFIMCGVLLCMYDRCAYITGGICFAVAAVFDILVLVGWIAIYNNL---QDDYYXXXXXXXXXXXDGEWEDWKNVILWFALLPFLGALSLGLGAVFSFTSLCFWKDAGSPA 147          
BLAST of mRNA_Ecto-sp9_F_contig9592.17709.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1J6_9PHAE)

HSP 1 Score: 68.6 bits (166), Expect = 2.040e-11
Identity = 42/138 (30.43%), Postives = 70/138 (50.72%), Query Frame = 0
Query:    1 ARGCAVLSIVIHVISFFLGG--DFFVWQRRACFTAFVIGGLLLCVYERYMYVIGSVGFALCAVFDVLAVLRWITLDDEIFDSDDDYYTIFQXXXXQSEESSDNTILLWLAVPSFLGAIAMGLGAIFTFTAVSVWKYGG 136
            +RG  + SIV+H I+    G   + VW   A   +F++GG+LLC + +  Y++    F L  +FD++A+  WI L      SD+ YY   Q            + + W A+P+ LGA++  +  +F F A+  W+  G
Sbjct:   28 SRGATIASIVVHAIALLAFGWIAWSVWL--ASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVAMAAWIALAT----SDNYYYNGTQL----------TSAVGWFALPAALGALSFIIAIVFIFLAICNWEKSG 149          
BLAST of mRNA_Ecto-sp9_F_contig9592.17709.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5D4_ECTSI)

HSP 1 Score: 65.9 bits (159), Expect = 2.540e-10
Identity = 39/136 (28.68%), Postives = 69/136 (50.74%), Query Frame = 0
Query:    1 ARGCAVLSIVIHVISFFLGGDFFVWQRRACFTAFVIGGLLLCVYERYMYVIGSVGFALCAVFDVLAVLRWITLDDEIFDSDDDYYTIFQXXXXQSEESSDNTILLWLAVPSFLGAIAMGLGAIFTFTAVSVWKYGG 136
            +RG  + +IV+H I+    G        A   +F++GG+LLC + +  Y++    F L  +FD++++  WI      + + D+YY         SE SS    + W A+P+ LGA++  +  +F F A+  W+  G
Sbjct:   40 SRGATIATIVVHAIALLAFGWILWGIWLASLISFIMGGILLCQFNKCTYIVAGSLFILGCIFDLVSMAAWIA-----YATSDNYY------YNGSELSS---AVGWFALPAALGALSFIVAIVFIFLAICNWEKSG 161          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9592.17709.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized2.560e-8385.31protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized6.780e-4754.93protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FYM8... [more]
Uncharacterized5.070e-2740.85protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.040e-1130.43protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.540e-1028.68protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 72..102
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 103..126
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 127..147
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 47..71
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 27..46
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..26
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 5..24
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 29..44

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9592contigEcto-sp9_F_contig9592:214..1235 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9592.17709.1mRNA_Ecto-sp9_F_contig9592.17709.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9592 214..1235 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9592.17709.1 ID=prot_Ecto-sp9_F_contig9592.17709.1|Name=mRNA_Ecto-sp9_F_contig9592.17709.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=148bp
ARGCAVLSIVIHVISFFLGGDFFVWQRRACFTAFVIGGLLLCVYERYMYV
IGSVGFALCAVFDVLAVLRWITLDDEIFDSDDDYYTIFQDDDAQSEESSD
NTILLWLAVPSFLGAIAMGLGAIFTFTAVSVWKYGGGTAIPHVRAEK*
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