prot_Ecto-sp9_F_contig959.17707.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig959.17707.1
Unique Nameprot_Ecto-sp9_F_contig959.17707.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length138
Homology
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BLAST of mRNA_Ecto-sp9_F_contig959.17707.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX2_ECTSI)

HSP 1 Score: 268 bits (685), Expect = 9.430e-90
Identity = 126/139 (90.65%), Postives = 133/139 (95.68%), Query Frame = 0 
Query:    1 FEFSFNGPLLYGDVDI--LTLEISALVKKGSGDHWQVDMFNTRRGKRWDKIGNLSKAGSDWSTSNLVVMNDDGCGDAPKRINTTRTKRWKPKRCISDYFDTDSNEVLICVHTRGSKEVVFIDYAHIQARFGFNPHSGGA 137
            FEFSFNGPLLYGDVD+  LTLE+SALVKKGSGDHWQVDMFNTRRGKRWDKIG+LS+AGSDWSTSNLVVM+DDGCGDAPKRINTTRTKRWKPKRCISDYFDTDSNEVLI VHTR SKEVVFIDYAHI+A FG NPH+GGA
Sbjct:   73 FEFSFNGPLLYGDVDVNTLTLELSALVKKGSGDHWQVDMFNTRRGKRWDKIGDLSEAGSDWSTSNLVVMSDDGCGDAPKRINTTRTKRWKPKRCISDYFDTDSNEVLIRVHTRESKEVVFIDYAHIKASFGLNPHAGGA 211
[Close]
BLAST of mRNA_Ecto-sp9_F_contig959.17707.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDX1_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 4.060e-74
Identity = 109/139 (78.42%), Postives = 121/139 (87.05%), Query Frame = 0 
Query:    1 FEFSFNGPLLYGDVD--ILTLEISALVKKGSGDHWQVDMFNTRRGKRWDKIGNLSKAGSDWSTSNLVVMNDDGCGDAPKRINTTRTKRWKPKRCISDYFDTDSNEVLICVHTRGSKEVVFIDYAHIQARFGFNPHSGGA 137
            +EFSF+ PLL+GDVD  ILTLE+SALV KGSGD WQVDMFN+RRGK+WDKIG+LSKAGSDW+TSNLVV + D CGDAPKRINTTRTK  K KRCISDYFDTDSNEVLI +HT GSKEV+FIDYA I+  F FNPHSG A
Sbjct:   38 YEFSFSAPLLFGDVDANILTLELSALVMKGSGDRWQVDMFNSRRGKKWDKIGDLSKAGSDWTTSNLVVASGDRCGDAPKRINTTRTKSQKSKRCISDYFDTDSNEVLIRIHTPGSKEVIFIDYARIKPSFRFNPHSGHA 176
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig959.17707.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized9.430e-9090.65protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.060e-7478.42protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF14741GH114_assoccoord: 2..98
e-value: 1.2E-25
score: 90.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig959contigEcto-sp9_F_contig959:25519..26409 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig959.17707.1mRNA_Ecto-sp9_F_contig959.17707.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig959 25519..26409 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig959.17707.1 ID=prot_Ecto-sp9_F_contig959.17707.1|Name=mRNA_Ecto-sp9_F_contig959.17707.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=138bp
FEFSFNGPLLYGDVDILTLEISALVKKGSGDHWQVDMFNTRRGKRWDKIG
NLSKAGSDWSTSNLVVMNDDGCGDAPKRINTTRTKRWKPKRCISDYFDTD
SNEVLICVHTRGSKEVVFIDYAHIQARFGFNPHSGGA*
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