prot_Ecto-sp9_F_contig958.17701.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig958.17701.1
Unique Nameprot_Ecto-sp9_F_contig958.17701.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length295
Homology
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BLAST of mRNA_Ecto-sp9_F_contig958.17701.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P4_ECTSI)

HSP 1 Score: 270 bits (689), Expect = 2.160e-87
Identity = 157/157 (100.00%), Postives = 157/157 (100.00%), Query Frame = 0 
Query:   40 MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQATDKYNALMKQ 196
            MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQATDKYNALMKQ
Sbjct:    1 MPGNKKKNKGANKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQATDKYNALMKQ 157
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BLAST of mRNA_Ecto-sp9_F_contig958.17701.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YIF9_9STRA)

HSP 1 Score: 100 bits (249), Expect = 4.110e-22
Identity = 65/133 (48.87%), Postives = 97/133 (72.93%), Query Frame = 0 
Query:   53 AKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQ 185
            +K+   +SNAANK+DL GLDE+L++P  M + + + V  +  K ++G +NA+IG++GF+QAT+NPAMF +AMSML DP+   XXXXXXXXX       ++M +LK + +F++AM  AQ K+Q L+ DPEK++Q
Sbjct:   11 SKSPTRKSNAANKEDLDGLDELLADPALMKQFEDKTVPPA--KKKTGAENARIGMEGFSQATKNPAMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXXQRHMASLKMDPSFQEAMQTAQSKFQELMQDPEKLQQ 141
[Close]
BLAST of mRNA_Ecto-sp9_F_contig958.17701.1 vs.
Match: EGF-like (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZF98_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 3.280e-12
Identity = 50/96 (52.08%), Postives = 68/96 (70.83%), Query Frame = 0 
Query:   95 KPRSGKQNAQIGLKGFTQATQNPAMFKDAMSMLGDPSXXXXXXXXXXXXEFKSEINQYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQATDKY 190
            KP SG +NA+IG++GF  AT NP MF +AMSML DP+   XXXXXXXXX     I ++M +LK++ AF+DAM  AQ K+Q L+ DP K+++   +Y
Sbjct:  544 KPVSGAENARIGMEGFKAATGNPQMFAEAMSMLSDPNAVKXXXXXXXXXXXXXXIQKHMASLKSDPAFQDAMLSAQAKFQDLIKDPTKLQELQSQY 639
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig958.17701.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized2.160e-87100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5P4... [more]
Uncharacterized4.110e-2248.87protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
EGF-like3.280e-1252.08domain-containing protein n=1 Tax=Tribonema minus ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 159..179
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 21..294
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 6..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 16..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..20
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..5
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..20
score: 0.707

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig958contigEcto-sp9_F_contig958:3798..13397 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig958.17701.1mRNA_Ecto-sp9_F_contig958.17701.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig958 3798..13397 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig958.17701.1 ID=prot_Ecto-sp9_F_contig958.17701.1|Name=mRNA_Ecto-sp9_F_contig958.17701.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=295bp
PTTHNCVSLLVLCLFSPSFGGKYSSERRISTGVDGQRARMPGNKKKNKGA
NKAKNAPARSNAANKDDLAGLDEILSNPEQMAEAQREAVEASGFKPRSGK
QNAQIGLKGFTQATQNPAMFKDAMSMLGDPSAVKEAEAMMNDPEFKSEIN
QYMETLKNNSAFRDAMAEAQRKYQALLADPEKMKQATDKYNALMKQQQDA
AAAGTPAAAAAAGGGEGAAGAAGATQAGKEAAAGGEDDGEPPVPEAGAEG
EEEEAPAGKDEGAGAGKEAAEAAPADAPEAEAAAGKETPAEASS*
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