prot_Ecto-sp9_F_contig9576.17696.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9576.17696.1
Unique Nameprot_Ecto-sp9_F_contig9576.17696.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length127
Homology
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: MPN (domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5K085_9PHAE)

HSP 1 Score: 261 bits (667), Expect = 2.090e-78
Identity = 124/127 (97.64%), Postives = 126/127 (99.21%), Query Frame = 0
Query:    1 NRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD 127
            +RNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLK+EDPDLPAFYFDPVINPISAFRSTRTSGWEE EDDD
Sbjct:  347 DRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKAEDPDLPAFYFDPVINPISAFRSTRTSGWEEAEDDD 473          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2APL4_9STRA)

HSP 1 Score: 209 bits (531), Expect = 4.300e-60
Identity = 99/132 (75.00%), Postives = 116/132 (87.88%), Query Frame = 0
Query:    1 NRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTR-------TSGWEEEED 125
            + NY++LF++K+FFTAKALNVA+PGGPKFEPL+RDMD DEEDWNEFNDINKIIIRHQIR+EY+V FPYLYNSRPR VHL PYH P LYY+K++DPDLPAFYFDPVINP+SAFR+ R       TS WEE+E+
Sbjct:  592 DNNYFHLFEQKSFFTAKALNVAIPGGPKFEPLYRDMDVDEEDWNEFNDINKIIIRHQIRTEYKVQFPYLYNSRPRKVHLMPYHSPPLYYIKADDPDLPAFYFDPVINPLSAFRTERATPSEDETSLWEEDEE 723          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Pre-mRNA-processing-splicing (factor 8 n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZGU7_9STRA)

HSP 1 Score: 206 bits (524), Expect = 3.750e-59
Identity = 99/127 (77.95%), Postives = 113/127 (88.98%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFR--STRTSGWEEEEDDD 127
            NY YLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPRAVH+ PYH PAL Y+K+EDPDLPAFYFDP+INPIS FR  S   +   + EDDD
Sbjct:  276 NYQYLFDKQSFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRAVHIQPYHAPALCYIKAEDPDLPAFYFDPIINPISQFRINSAGKAAPSDTEDDD 402          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Pre-mRNA-processing-splicing (factor 8 n=9 Tax=Saprolegniaceae TaxID=4764 RepID=A0A024U0S5_9STRA)

HSP 1 Score: 206 bits (523), Expect = 5.120e-59
Identity = 96/125 (76.80%), Postives = 111/125 (88.80%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDDD 127
            NY YLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPRAVH+ PYH PAL Y+K+EDPDLPAFYFDP++NPIS FR   T      +DD+
Sbjct:  307 NYQYLFDKESFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRAVHIQPYHVPALCYVKAEDPDLPAFYFDPIVNPISQFRVAATKSDTPADDDE 431          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MHY6_9STRA)

HSP 1 Score: 203 bits (516), Expect = 1.150e-58
Identity = 91/117 (77.78%), Postives = 110/117 (94.02%), Query Frame = 0
Query:    1 NRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRD-MDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTR 116
            ++NYWYLF+ K+FFTAKALN+A+PGGPKFEPLFRD +  D+EDWNEFNDINKIIIRHQ+R+EYR+AFP+LYNSRPRAVH+ PYH+P LYY+K++DPDLPAFYFDP+INPISAFR+ R
Sbjct:  292 DKNYWYLFEGKSFFTAKALNLAIPGGPKFEPLFRDNIGVDDEDWNEFNDINKIIIRHQLRTEYRIAFPFLYNSRPRAVHMGPYHYPPLYYIKADDPDLPAFYFDPIINPISAFRTER 408          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Hypothetical (protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZNT2_9STRA)

HSP 1 Score: 204 bits (520), Expect = 1.300e-58
Identity = 95/124 (76.61%), Postives = 110/124 (88.71%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTRTSGWEEEEDD 126
            NY++LFD+++FFTAKALN+A+PGGPKFEPLFRD D DE+DWNEFNDINKI+IRHQIR+EY+V FPYLY SRPRAV LAPYHHP LYY+K +DPDLPAFYFDPV+NPISAFRS      + EEDD
Sbjct:  296 NYFHLFDRRSFFTAKALNLAIPGGPKFEPLFRDHDADEDDWNEFNDINKIVIRHQIRTEYKVQFPYLYTSRPRAVALAPYHHPPLYYVKPDDPDLPAFYFDPVVNPISAFRSKAVKEVDVEEDD 419          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AUD0_9STRA)

HSP 1 Score: 204 bits (519), Expect = 1.690e-58
Identity = 96/127 (75.59%), Postives = 116/127 (91.34%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFR---STRTSGWEEEEDD 126
            NY YLFDK++FFTAKALNVA+PGGPKFEPL+RD+D+D+EDWNEFNDINKIIIRHQIR+EYRVAFPYLYNSRPR+VH+ PYH PAL Y+K+EDPDLPAFYFDP++NPIS FR   ++R +  +EEE++
Sbjct:  147 NYQYLFDKESFFTAKALNVAIPGGPKFEPLYRDLDQDDEDWNEFNDINKIIIRHQIRTEYRVAFPYLYNSRPRSVHIQPYHVPALCYVKAEDPDLPAFYFDPIVNPISQFRVAAASRATLTDEEEEE 273          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Pre-mRNA-processing-splicing (factor 8 n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4YJN0_9STRA)

HSP 1 Score: 201 bits (512), Expect = 2.370e-58
Identity = 91/115 (79.13%), Postives = 106/115 (92.17%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTRT 117
            NY YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+K+EDPDLPAFYFDP++NPIS FR  R+
Sbjct:  263 NYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRS 377          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: Pre-mRNA-processing-splicing (factor 8 n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0NFV2_PHYIT)

HSP 1 Score: 203 bits (517), Expect = 3.290e-58
Identity = 96/128 (75.00%), Postives = 113/128 (88.28%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTRTSG---WEEEEDDD 127
            NY YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+K+EDPDLPAFYFDP++NPIS FR  R+      +EEEDD+
Sbjct:  230 NYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNRSDKDKTIDEEEDDE 357          
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Match: MPN (domain-containing protein n=6 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RPM5_9STRA)

HSP 1 Score: 202 bits (515), Expect = 6.150e-58
Identity = 95/121 (78.51%), Postives = 110/121 (90.91%), Query Frame = 0
Query:    3 NYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDINKIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAFYFDPVINPISAFRSTRTSGWEEE 123
            NY YLFDKK+FFTAKALNVA+PGGPKFEPL+RD+D D+EDWNEFNDINKIIIRHQIR+EY+VAFP+LYNSRPR+VH+ PYH P L Y+K+EDPDLPAFYFDP++NPIS FR  R SG E+E
Sbjct:  266 NYEYLFDKKSFFTAKALNVAIPGGPKFEPLYRDLDEDDEDWNEFNDINKIIIRHQIRTEYKVAFPFLYNSRPRSVHIQPYHTPVLCYIKAEDPDLPAFYFDPIVNPISHFRVNR-SGKEQE 385          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9576.17696.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
MPN2.090e-7897.64domain-containing protein n=2 Tax=Ectocarpus TaxID... [more]
Hypothetical4.300e-6075.00protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Pre-mRNA-processing-splicing3.750e-5977.95factor 8 n=1 Tax=Achlya hypogyna TaxID=1202772 Rep... [more]
Pre-mRNA-processing-splicing5.120e-5976.80factor 8 n=9 Tax=Saprolegniaceae TaxID=4764 RepID=... [more]
Hypothetical1.150e-5877.78protein (Fragment) n=1 Tax=Spumella elongata TaxID... [more]
Hypothetical1.300e-5876.61protein n=2 Tax=Pelagomonas calceolata TaxID=35677... [more]
Uncharacterized1.690e-5875.59protein n=1 Tax=Aphanomyces astaci TaxID=112090 Re... [more]
Pre-mRNA-processing-splicing2.370e-5879.13factor 8 n=1 Tax=Phytophthora palmivora var. palmi... [more]
Pre-mRNA-processing-splicing3.290e-5875.00factor 8 n=1 Tax=Phytophthora infestans (strain T3... [more]
MPN6.150e-5878.51domain-containing protein n=6 Tax=Peronosporaceae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027652Pre-mRNA-processing-splicing factor 8PANTHERPTHR11140PRE-MRNA SPLICING FACTOR PRP8coord: 1..125
NoneNo IPR availablePANTHERPTHR11140:SF1coord: 1..125

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9576contigEcto-sp9_F_contig9576:4355..5180 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9576.17696.1mRNA_Ecto-sp9_F_contig9576.17696.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9576 4355..5180 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9576.17696.1 ID=prot_Ecto-sp9_F_contig9576.17696.1|Name=mRNA_Ecto-sp9_F_contig9576.17696.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=127bp
NRNYWYLFDKKAFFTAKALNVAMPGGPKFEPLFRDMDRDEEDWNEFNDIN
KIIIRHQIRSEYRVAFPYLYNSRPRAVHLAPYHHPALYYLKSEDPDLPAF
YFDPVINPISAFRSTRTSGWEEEEDDD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027652PRP8