prot_Ecto-sp9_F_contig9552.17673.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9552.17673.1
Unique Nameprot_Ecto-sp9_F_contig9552.17673.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length649
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9552.17673.1 vs.
Match: Telomerase (reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4G7_ECTSI)

HSP 1 Score: 948 bits (2451), Expect = 0.000e+0
Identity = 568/655 (86.72%), Postives = 580/655 (88.55%), Query Frame = 0 
Query:    2 QAPAAAGGEQAGPPPAASHQGTTGNRATNGKTSGSPVEAPATISRVAHDLVRDVFASSLDGEGLGRQQQPLVDAAHGKGRPGELQRAGSGVMPKATGAPGKVALGGGGARRRLPNRLRRAVPLFEEMIGRAHRCNIGRLLEAHCPLPQSVRGTKAGKRGPGEGEQQLGPNK-----QAAAPPPSPSDVSTLHEEVGEQAEDISAADLWRQEVTSGGDEDAGWEGGVGDNSXXXXXXXXXXXXXXXNTEPGESXXXEDMMDTGSTVKEVRMEDSDSFTVRTHGGVGGISCADGMQGEEEA--GIGSILSSDRASAERAAEPQRLLRGGCADASPWGSVSRGTHGSGGGMSGSSSGGDDSGNISDSTLLDEAPTANGASVPAAVVHASPPLPPPVQPTFSVDPNMTFIEMATEHRRVVGFLCQACHRVRKHSPDDQLWGSRRNMVCLSRGIERFVVLRRHETMSVLEVTAGMRTSDLEWMAVGAADGKAPXXXXXXXXXXXXXXXEPAKTRRVNNGKRKPRGGPVGGDGNCKRPRGGGDAGGAANGTDRARADSHRHHGSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRVAVGSKGDKSIRRRRRR-TRQRLPPSDLAKRVELLEALVLWTFKNVIVPL 648
            QAPAAAGGEQAGPPPAASHQGTTGNRATNG TSGSPV  PA ISRVAHDLVRD FASSL GE LGRQQQPL DAAHGKGRPG LQRAGSGVMPKATGA GKVALG GGARRRLP RLRRAVPLFEE IGRAHRCNIGRLLEA CPLPQSVRGTKAGKRG GEGEQ LGPNK     QAAAPPPSPSDVSTLHEEVGEQAED+SAADL RQEVT+ GDED+GWEG      XXXXXXXXXXXXXXX  EPGES   ED+MDTGSTVKEVRMED+DSFTVRTHGGVGGISCADGMQGEEE   GIGS+LSSDRASAERAAEP+RL RGGCADASPWGSVSRG H SGG            GNISD+TLLDEAPTANGAS  AA V ASPPLPPP QPTFSVDPN TFIEMATEHRRVV FLCQACHR+       +LWGSRRNMVCLSRGIERFVVLR HETMSVLEVTAGMRTSDLEWMAVGAADGKAPXXXXXXXXXXXXXXXEPAKTRRVNNGKRK +GGPVGGDGNCKRPRGG DAGGAANGTDRARADSH HHGSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRVAVGSKGDKSIRR     TRQRLPPSDLAKRVELLEALVLWTFK+VIVPL
Sbjct:  227 QAPAAAGGEQAGPPPAASHQGTTGNRATNGNTSGSPVGDPAIISRVAHDLVRDAFASSLHGEDLGRQQQPLGDAAHGKGRPGVLQRAGSGVMPKATGASGKVALGDGGARRRLPKRLRRAVPLFEERIGRAHRCNIGRLLEAQCPLPQSVRGTKAGKRGAGEGEQPLGPNKREGGFQAAAPPPSPSDVSTLHEEVGEQAEDVSAADLLRQEVTASGDEDSGWEGXX----XXXXXXXXXXXXXXXXKEPGESDEEEDVMDTGSTVKEVRMEDNDSFTVRTHGGVGGISCADGMQGEEEEEEGIGSVLSSDRASAERAAEPERLFRGGCADASPWGSVSRGAHESGGXXXXXXXXXXXXGNISDATLLDEAPTANGASALAAGVQASPPLPPPDQPTFSVDPNTTFIEMATEHRRVVDFLCQACHRIFP----TELWGSRRNMVCLSRGIERFVVLRWHETMSVLEVTAGMRTSDLEWMAVGAADGKAPXXXXXXXXXXXXXXXEPAKTRRVNNGKRKAKGGPVGGDGNCKRPRGGADAGGAANGTDRARADSHGHHGSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRVAVGSKGDKSIRRXXXXXTRQRLPPSDLAKRVELLEALVLWTFKDVIVPL 873
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9552.17673.1 vs.
Match: Telomerase (reverse transcriptase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G237_ECTSI)

HSP 1 Score: 910 bits (2353), Expect = 0.000e+0
Identity = 535/653 (81.93%), Postives = 551/653 (84.38%), Query Frame = 0 
Query:    2 QAPAAAGGEQAGPPPAASHQGTTGNRATNGKTSGSPVEAPATISRVAHDLVRDVFASSLDGEGLGRQQQPLVDAAHGKGRPGELQRAGSGVMPKATGAPGKVALGGGGARRRLPNRLRRAVPLFEEMIGRAHRCNIGRLLEAHCPLPQSVRGTKAGKRGPGEGEQQLGPNK-----QAAAPPPSPSDVSTLHEEVGEQAEDISAADLWRQEVTSGGDEDAGWEGGVGDNSXXXXXXXXXXXXXXXNTEPGESXXXEDMMDTGSTVKEVRMEDSDSFTVRTHGGVGGISCADGMQGEEEAGIGSILSSDRASAERAAEPQRLLRGGCADASPWGSVSRGTHGSGGGMSGSSSGGDDSGNISDSTLLDEAPTANGASVPAAVVHASPPLPPPVQPTFSVDPNMTFIEMATEHRRVVGFLCQACHRVRKHSPDDQLWGSRRNMVCLSRGIERFVVLRRHETMSVLEVTAGMRTSDLEWMAVGAADGKAPXXXXXXXXXXXXXXXEPAKTRRVNNGKRKPRGGPVGGDGNCKRPRGGGDAGGAANGTDRARADSHRHHGSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRVAVGSKGDKSIRRRRRR-TRQRLPPSDLAKRVELLEALVLWTFKNVIVPL 648
            QAPAAAGGEQAGPPPAASHQGTTGNRATNGKTSGSPVEAPATISRVAHDLVRD FASSL GE LGRQQQPL DAAHGKGRPG LQRAGSGVMPKATG+PGK+ALGGGGARRRLP RLRRAVPLFEEMIGRAHRCNIGRLLEAHCPLPQSVRGTKAGKRGPGEG Q LGPNK     QAAAPPPSPSDVSTLHEEVG QAED+SAADLWRQEVT+  DED           XXXXXXXXXXXXXXX  EPGES   ED+MDTGSTVKEVR +D+D FTVRTHGGVGGISCADG+QGEEE GIGS+LSSDRASAERAAEPQRLLRGGCADASPWGSVSRG+H SGGG SGS      SGNISD+TLLDEAPTANGAS  AA V ASPPLPPP QPTFSVDPNMTFIEMATEHRRVV FLCQACHR+       +LWGSRRNMVCLSRGIERFVVLRRH+TMSVLE                                      EPAKTRRVNNGKRK +GGPVGGDGNCKRPRGG DAGGAANGTDRARADSH HHGSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRVAVGSKGDKSIRR     TRQRLPPSDLAKRVELLEALVLWTFK+VIVPL
Sbjct:  227 QAPAAAGGEQAGPPPAASHQGTTGNRATNGKTSGSPVEAPATISRVAHDLVRDAFASSLHGEDLGRQQQPLGDAAHGKGRPGVLQRAGSGVMPKATGSPGKLALGGGGARRRLPKRLRRAVPLFEEMIGRAHRCNIGRLLEAHCPLPQSVRGTKAGKRGPGEGGQPLGPNKREGGFQAAAPPPSPSDVSTLHEEVGGQAEDVSAADLWRQEVTASEDEDXXXXXXX----XXXXXXXXXXXXXXXXKEPGESDEEEDVMDTGSTVKEVRTKDNDYFTVRTHGGVGGISCADGVQGEEEEGIGSVLSSDRASAERAAEPQRLLRGGCADASPWGSVSRGSHESGGGTSGSXXXXXXSGNISDATLLDEAPTANGASALAAGVQASPPLPPPDQPTFSVDPNMTFIEMATEHRRVVDFLCQACHRIFP----TELWGSRRNMVCLSRGIERFVVLRRHDTMSVLE-------------------------------QQQQQDQEPAKTRRVNNGKRKAKGGPVGGDGNCKRPRGGADAGGAANGTDRARADSHGHHGSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRVAVGSKGDKSIRRXXXXXTRQRLPPSDLAKRVELLEALVLWTFKDVIVPL 840
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9552.17673.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Telomerase0.000e+086.72reverse transcriptase n=1 Tax=Ectocarpus siliculos... [more]
Telomerase0.000e+081.93reverse transcriptase n=1 Tax=Ectocarpus siliculos... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR021891Telomerase ribonucleoprotein complex - RNA-binding domainSMARTSM00975Telomerase_RBD_2coord: 407..649
e-value: 1.5E-5
score: 26.4
IPR021891Telomerase ribonucleoprotein complex - RNA-binding domainPFAMPF12009Telomerase_RBDcoord: 409..496
e-value: 9.1E-11
score: 42.0
NoneNo IPR availableGENE3D1.10.132.70coord: 380..505
e-value: 3.6E-13
score: 51.6
coord: 103..174
e-value: 3.7E-6
score: 28.6
IPR003545Telomerase reverse transcriptasePANTHERPTHR12066TELOMERASE REVERSE TRANSCRIPTASEcoord: 110..649

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9552contigEcto-sp9_F_contig9552:449..5002 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9552.17673.1mRNA_Ecto-sp9_F_contig9552.17673.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9552 449..5002 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9552.17673.1 ID=prot_Ecto-sp9_F_contig9552.17673.1|Name=mRNA_Ecto-sp9_F_contig9552.17673.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=649bp
GQAPAAAGGEQAGPPPAASHQGTTGNRATNGKTSGSPVEAPATISRVAHD
LVRDVFASSLDGEGLGRQQQPLVDAAHGKGRPGELQRAGSGVMPKATGAP
GKVALGGGGARRRLPNRLRRAVPLFEEMIGRAHRCNIGRLLEAHCPLPQS
VRGTKAGKRGPGEGEQQLGPNKQAAAPPPSPSDVSTLHEEVGEQAEDISA
ADLWRQEVTSGGDEDAGWEGGVGDNSSSSSSNNSSDDSEDENTEPGESDE
EEDMMDTGSTVKEVRMEDSDSFTVRTHGGVGGISCADGMQGEEEAGIGSI
LSSDRASAERAAEPQRLLRGGCADASPWGSVSRGTHGSGGGMSGSSSGGD
DSGNISDSTLLDEAPTANGASVPAAVVHASPPLPPPVQPTFSVDPNMTFI
EMATEHRRVVGFLCQACHRVRKHSPDDQLWGSRRNMVCLSRGIERFVVLR
RHETMSVLEVTAGMRTSDLEWMAVGAADGKAPPPPPEQQQQQQQQDQEPA
KTRRVNNGKRKPRGGPVGGDGNCKRPRGGGDAGGAANGTDRARADSHRHH
GSERIHGGGGGRGSGSVEARGSFPGTSNQGTKRADTSKKKKARGGGKGRV
AVGSKGDKSIRRRRRRTRQRLPPSDLAKRVELLEALVLWTFKNVIVPLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR021891Telomerase_RBD
IPR003545Telomerase_RT