prot_Ecto-sp9_F_contig9495.17629.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9495.17629.1
Unique Nameprot_Ecto-sp9_F_contig9495.17629.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length116
Homology
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE8_ECTSI)

HSP 1 Score: 209 bits (533), Expect = 1.460e-60
Identity = 106/106 (100.00%), Postives = 106/106 (100.00%), Query Frame = 0
Query:    1 REEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM 106
            REEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM
Sbjct: 1267 REEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM 1372          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZE9_ECTSI)

HSP 1 Score: 174 bits (440), Expect = 4.920e-48
Identity = 85/105 (80.95%), Postives = 96/105 (91.43%), Query Frame = 0
Query:    2 EEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM 106
            + +IDSG +SFNV+ ++LIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSS+LWD+VSLIPP+AFTLI+LAAADV  LISGE G  TFLLFLL+G SM
Sbjct: 1288 QNNIDSGVDSFNVTFYILIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSYLWDFVSLIPPMAFTLIILAAADVDTLISGEAGATTFLLFLLYGTSM 1392          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L5M8_9PHAE)

HSP 1 Score: 171 bits (432), Expect = 5.690e-47
Identity = 83/105 (79.05%), Postives = 95/105 (90.48%), Query Frame = 0
Query:    2 EEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM 106
            + + DSG +SFNV+ ++LIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSS+LWD+VSL+PP+AFTLI+LAAADV  LISGE G  TFLLFLL+G SM
Sbjct:  371 QNNFDSGVDSFNVTFYILIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSYLWDFVSLMPPMAFTLIILAAADVGTLISGEAGATTFLLFLLYGTSM 475          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: ATP-binding (Cassette (ABC) Superfamily n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZA6_ECTSI)

HSP 1 Score: 115 bits (289), Expect = 1.120e-27
Identity = 55/105 (52.38%), Postives = 73/105 (69.52%), Query Frame = 0
Query:    3 EDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSMV 107
            E+I     +F + +F ++AFSFVPA W+ +IVREK+TKCKHQQ+VSGVGLEAYW SSFLWD+ S + P+ F +++     V +L       A  LLF+LFG SMV
Sbjct: 1286 EEILDFVQTFFIIIFTIMAFSFVPAGWIMFIVREKDTKCKHQQIVSGVGLEAYWFSSFLWDFGSFLVPMTFAIVLFKGLGVDSLFENGADAAFVLLFILFGLSMV 1390          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: Hypothetical (protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XYR3_HETAK)

HSP 1 Score: 104 bits (260), Expect = 9.120e-24
Identity = 51/104 (49.04%), Postives = 73/104 (70.19%), Query Frame = 0
Query:    5 IDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVS-LIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSMV 107
            +D   + F V++FM +AF+F+PA +  Y++RE+E K KHQQVVSGV L AYWLSS+ WD+   L+ P   T I+LAA D++AL++G+ G A  L  LL G ++V
Sbjct: 1281 LDGSVDGFTVTIFMTMAFAFIPAGFAQYVIREREMKTKHQQVVSGVSLNAYWLSSYAWDFCQYLLGPFLLTEILLAAFDIEALVNGDGGGAACLALLLNGLAIV 1384          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: ABC (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JS94_9PHAE)

HSP 1 Score: 101 bits (251), Expect = 1.460e-22
Identity = 54/128 (42.19%), Postives = 72/128 (56.25%), Query Frame = 0
Query:    3 EDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQ------------------------VVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM 106
            E+I     +F + +F ++AFSFVPA W+ +IVREK+TKCKHQQ                        +VSGVGLEAYW SSFLWD+ S + P+ F +++     V +L       A  LLF+LFG SM
Sbjct:  987 EEIIDFVQTFFIIIFSIMAFSFVPAGWIMFIVREKDTKCKHQQPPRLLDRSLPFNLHLPAIAPHLDQIVSGVGLEAYWFSSFLWDFGSFLVPMTFAIVLFKGLGVDSLFENGADAAFVLLFILFGLSM 1114          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: ABCA1 (protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812QND9_SYMMI)

HSP 1 Score: 99.0 bits (245), Expect = 9.360e-22
Identity = 44/94 (46.81%), Postives = 66/94 (70.21%), Query Frame = 0
Query:   10 NSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFG 103
            ++F  +LF +IAF F+PA++ ++IV+EKE K KHQQ++SGV + AYW SS++WD +S +P VA  + ++ A  V      +   ATFLLFLL+G
Sbjct:  351 DAFTAALFFMIAFCFIPASYASFIVKEKEVKAKHQQIISGVSIYAYWCSSYVWDILSYLPTVALVVCIVLAFGVDNYTKNDGAPATFLLFLLYG 444          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: Hypothetical (protein (Fragment) n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNI1_HETAK)

HSP 1 Score: 97.4 bits (241), Expect = 2.660e-21
Identity = 52/106 (49.06%), Postives = 70/106 (66.04%), Query Frame = 0
Query:    3 EDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVS-LIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSMV 107
            E I    ++FN+ +F+L+AF+F+PA +  YIVRE+E+K KHQQVVSGV L A+WLSS  WD+++ L  P+A TL +L   DV  LI    G     L LLFG + V
Sbjct:  207 EAISESVDAFNLVIFVLMAFAFIPAGFAQYIVRERESKTKHQQVVSGVSLPAFWLSSLAWDFLTYLAGPLALTLALLHGYDVDQLIDRPAGPLVVYLLLLFGLAAV 312          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FPQ1_VITBC)

HSP 1 Score: 97.4 bits (241), Expect = 3.330e-21
Identity = 45/101 (44.55%), Postives = 66/101 (65.35%), Query Frame = 0
Query:    6 DSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSM 106
            +  F  F+ ++F+ + F+F+PA W   IVRE+ETK KHQQ +SGV + AYWLS++LWD V  + P     I++ A DVK+L+ G    ATF + L +G S+
Sbjct: 1255 EEAFADFDTAMFLSMGFAFIPAFWGLTIVRERETKAKHQQTISGVSIFAYWLSTWLWDSVVYLLPALLAFILMVAFDVKSLLEGAAAGATFTILLFYGISI 1355          
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSC0_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 8.520e-21
Identity = 48/113 (42.48%), Postives = 68/113 (60.18%), Query Frame = 0
Query:    2 EEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGVGLEAYWLSSFLWDYVSLI--PPVAFTLIVLAAADVKALISGENGVATFLLFLLFGFSMVGTVVF 112
            E +I+    +F   +F+++ F+F+PAAW  Y+VRE+ETK KHQQVVSGV L AYW S++ WD  S I  PP    L+ +       +     G+A FLL LL+G + +G   F
Sbjct: 1589 ESNINDNTFTFPTVIFLMVGFAFIPAAWCGYVVRERETKSKHQQVVSGVSLAAYWASTYAWDMASFILTPPAVMALLAMFGKSGSLIDGAAAGLACFLLLLLWGPANMGCTYF 1701          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9495.17629.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.460e-60100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.920e-4880.95protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
ABC5.690e-4779.05protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ATP-binding1.120e-2752.38Cassette (ABC) Superfamily n=1 Tax=Ectocarpus sili... [more]
Hypothetical9.120e-2449.04protein n=2 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
ABC1.460e-2242.19protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
ABCA19.360e-2246.81protein (Fragment) n=1 Tax=Symbiodinium microadria... [more]
Hypothetical2.660e-2149.06protein (Fragment) n=2 Tax=Heterosigma akashiwo Ta... [more]
Uncharacterized3.330e-2144.55protein n=1 Tax=Vitrella brassicaformis (strain CC... [more]
Uncharacterized8.520e-2142.48protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePFAMPF12698ABC2_membrane_3coord: 6..112
e-value: 4.2E-22
score: 78.7
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 82..92
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..81
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 114..115
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 35..54
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 93..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..11
NoneNo IPR availableTMHMMTMhelixcoord: 55..77
NoneNo IPR availableTMHMMTMhelixcoord: 92..114
NoneNo IPR availableTMHMMTMhelixcoord: 15..34
IPR026082ABC transporter APANTHERPTHR19229ATP-BINDING CASSETTE TRANSPORTER SUBFAMILY A ABCAcoord: 7..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9495contigEcto-sp9_F_contig9495:3992..4712 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9495.17629.1mRNA_Ecto-sp9_F_contig9495.17629.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9495 3992..4712 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9495.17629.1 ID=prot_Ecto-sp9_F_contig9495.17629.1|Name=mRNA_Ecto-sp9_F_contig9495.17629.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=116bp
REEDIDSGFNSFNVSLFMLIAFSFVPAAWMAYIVREKETKCKHQQVVSGV
GLEAYWLSSFLWDYVSLIPPVAFTLIVLAAADVKALISGENGVATFLLFL
LFGFSMVGTVVFGGC*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR026082ABCA