prot_Ecto-sp9_F_contig949.17625.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig949.17625.1
Unique Nameprot_Ecto-sp9_F_contig949.17625.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length222
Homology
BLAST of mRNA_Ecto-sp9_F_contig949.17625.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8_ECTSI)

HSP 1 Score: 385 bits (989), Expect = 2.010e-134
Identity = 207/222 (93.24%), Postives = 214/222 (96.40%), Query Frame = 0
Query:    1 MCKSSQPQGSSEAAPVAMNVPTGDSYDLAKPCAIPDSEQPHQEVIAHDEASGIVVFGSFVAGALIGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDVLLAVFRFAREYNHKHKLTDKAKAGAKEAAGKVSDKVRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAADAYVTDSSSSSS-SKGGKPKSFDA 221
            MCKSSQPQGSSEAAPVAM VPT DSYDLAKPCAI D+EQPHQEVIAHDEASGI+VFGSF+AGAL+GVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSD+LLAVFR AREYNHKHKLTDKAK GAKEAAGKV+DK+RKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGA DAYVTDSSSSSS SKG KPKSFDA
Sbjct:    1 MCKSSQPQGSSEAAPVAMEVPTNDSYDLAKPCAISDNEQPHQEVIAHDEASGIIVFGSFIAGALVGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDILLAVFRLAREYNHKHKLTDKAKVGAKEAAGKVTDKMRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAVDAYVTDSSSSSSYSKGRKPKSFDA 222          
BLAST of mRNA_Ecto-sp9_F_contig949.17625.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ0_ECTSI)

HSP 1 Score: 182 bits (462), Expect = 2.610e-54
Identity = 112/199 (56.28%), Postives = 142/199 (71.36%), Query Frame = 0
Query:   36 DSEQPH---QEVIAHDEASGIVVFGSFVAGALIGVVIC------APAFVVLLFGAGAAALTKSDSKVGKFSRKVGKVSSDVLLAVFRFAREYNHKHKLTDKAKAGAKEAAGKVSDKVRKLGIVDNVKARASSLWDQVDKRTAPAGQASIQAAQGQD-LSQVTDGTQIPFDGAADAYVTDSSSSSSSKGGKP---KSFDA 221
            D+EQ H   +  +AHDE+S I+V GSFVAGAL+G ++C      AP  VVLL GAGAA  TKSDSK G+ SR+VGK + DV LA+FR  RE+N+K++LT K +  A+EAAGKV  +V++LGI D VK RA SLW+QVDKRTAPAGQ  I+AAQGQD +S + +  Q+ FD AADA  + S SSSSS+  K    + FDA
Sbjct:   26 DTEQEHHHDESTLAHDESSAIIVLGSFVAGALVGAILCVRVFMFAPTVVVLLCGAGAAVFTKSDSKAGQISREVGKWTCDVFLALFRVVREFNYKYQLTVKVRITAQEAAGKVKAEVQRLGICDGVKTRARSLWEQVDKRTAPAGQPPIRAAQGQDTISLMMEEPQLGFDDAADALESKSCSSSSSEDEKTVRLRLFDA 224          
BLAST of mRNA_Ecto-sp9_F_contig949.17625.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTP9_ECTSI)

HSP 1 Score: 144 bits (362), Expect = 5.570e-39
Identity = 107/233 (45.92%), Postives = 137/233 (58.80%), Query Frame = 0
Query:    8 QGSSEAAPVAMNVPTGDSYDLAKPCAIPD-SEQPHQE---VIAHDEASGIVVFGSFVAGALIGVVIC------APAFVVLLFGA------------GAAALTKSDSKVGKFSRKVGKVSSDVLLAVFRFAREYNHKHKLTDKAKAGAKEAAGKVSDKVRKLGIVDNVKARASSLWDQVDKRTAPAGQAS--IQAAQGQD-LSQVTDGTQIPFDGAADAYVTDSSSSSSSKGGK 215
            QGS+  +  A N    DS+  AK   + + +EQ H     ++ HDE+S I + GSFVAGA +G +IC      AP   +LL GA             AA +TKSDSK G  SR+ G   SDVLLA+FR  RE+N  ++LTDK KA  +EAAGKV  +++K+GI D+V  RA SLWDQVDKRTAPA Q S  +  AQGQD +S   +  Q  FD A DA  +   S SSS+  K
Sbjct:    8 QGSAPGSEAAAN--RDDSHRHAKSFEVDNGTEQQHHRDGSILVHDESSAITMLGSFVAGASVGTMICVRLFMFAPIVFLLLCGACVAVMVVXXXXXXAAVVTKSDSKAGTISRRAGNFISDVLLALFRGVREFNRTYQLTDKVKATVQEAAGKVQVEMQKVGICDHVMTRACSLWDQVDKRTAPAAQPSKFVHGAQGQDTISLFREEPQPGFDNAGDAPKSAPCSPSSSENEK 238          
BLAST of mRNA_Ecto-sp9_F_contig949.17625.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUV7_9PHAE)

HSP 1 Score: 131 bits (329), Expect = 6.850e-35
Identity = 79/147 (53.74%), Postives = 100/147 (68.03%), Query Frame = 0
Query:   36 DSEQPH---QEVIAHDEASGIVVFGSFVAGALIGVVICA------PAFVVLLFGAGAAALTKSDSKVGKF----------SRKVGKVSSDVLLAVFRFAREYNHKHKLTDKAKAGAKEAAGKVSDKVRKLGIVDNVKARASSLWDQV 163
            D+EQ H   +  +AHDE+S I++ GSFVAGAL+G +ICA      P  VVLL GAGAA  T SDS+VGKF          SR VGK +SDV LA+FR  RE+N+K++L DK K  A+EAA KV  +V+++GI D VK RA SLW+QV
Sbjct:   26 DTEQEHHHDESTLAHDESSAIIMLGSFVAGALMGAIICARVFMFAPMVVVLLCGAGAAVFTNSDSEVGKFVVRLRWAGQISRGVGKWTSDVFLALFRVVREFNYKYQLADKVKITAQEAARKVKAEVQRIGICDGVKTRARSLWEQV 172          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig949.17625.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Uncharacterized2.010e-13493.24protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP8... [more]
Uncharacterized2.610e-5456.28protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.570e-3945.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.850e-3553.74protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 87..221
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..52
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 53..86
NoneNo IPR availableTMHMMTMhelixcoord: 54..76

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig949contigEcto-sp9_F_contig949:18312..21292 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig949.17625.1mRNA_Ecto-sp9_F_contig949.17625.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig949 18262..22776 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig949.17625.1 ID=prot_Ecto-sp9_F_contig949.17625.1|Name=mRNA_Ecto-sp9_F_contig949.17625.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=222bp
MCKSSQPQGSSEAAPVAMNVPTGDSYDLAKPCAIPDSEQPHQEVIAHDEA
SGIVVFGSFVAGALIGVVICAPAFVVLLFGAGAAALTKSDSKVGKFSRKV
GKVSSDVLLAVFRFAREYNHKHKLTDKAKAGAKEAAGKVSDKVRKLGIVD
NVKARASSLWDQVDKRTAPAGQASIQAAQGQDLSQVTDGTQIPFDGAADA
YVTDSSSSSSSKGGKPKSFDA*
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