prot_Ecto-sp9_F_contig943.17582.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig943.17582.1
Unique Nameprot_Ecto-sp9_F_contig943.17582.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length459
Homology
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4_ECTSI)

HSP 1 Score: 868 bits (2243), Expect = 0.000e+0
Identity = 443/458 (96.72%), Postives = 452/458 (98.69%), Query Frame = 0
Query:    1 MEEFLAAAKGGVTSISGDQWVAILRRFSSAHEATWAVSPLCGLDNKRILVRVVMELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQIYFVQLGGLDMLVGLLQASRQASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEVDVFMAKLQVLNLLLDMPGGFVEVLLEHGCLPRVVQLVELQLVRQEFQDDGVDAAAELTPGLLVLNKMMLASEESKMAVKRAIFPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCADEEEFTTRCGFGNAVNTLRLRGVISVPGIG 458
            MEEFLAAAKGGVTSISGDQWVAILRRFS+AHEATWAVSP+CGLDNKRILVRVV+ELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQI FVQLGGLDMLVGLLQASR ASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFT EEKKKALEGDTMKRLGYVLVDILHLDHAE+DVFMAKLQVLNLLLDMPGGF EVLLEHGCLPRVVQLVELQLVRQEFQD GVDAAAELTPGLLVLNKM+LASEESKMAVKRAIFPPEAD+VWKQRLEREKRELASLTGD+YKRAEK+SKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLC DEEEFTTRCGFGNAVNTLRLRG+ISVPGIG
Sbjct:    1 MEEFLAAAKGGVTSISGDQWVAILRRFSTAHEATWAVSPVCGLDNKRILVRVVVELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQISFVQLGGLDMLVGLLQASRPASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTQEEKKKALEGDTMKRLGYVLVDILHLDHAEIDVFMAKLQVLNLLLDMPGGFAEVLLEHGCLPRVVQLVELQLVRQEFQDGGVDAAAELTPGLLVLNKMVLASEESKMAVKRAIFPPEADEVWKQRLEREKRELASLTGDNYKRAEKISKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCVDEEEFTTRCGFGNAVNTLRLRGMISVPGIG 458          
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YV73_9STRA)

HSP 1 Score: 145 bits (366), Expect = 2.570e-34
Identity = 148/572 (25.87%), Postives = 219/572 (38.29%), Query Frame = 0
Query:   19 QWVAILRRFSSAHEATWAVSPLCGLDNKRILVRVVMELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQEALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQ----------------------PKGQIYFVQLGGLDMLVGLLQASRQASVLY-----------------------------FACRIFNVVGSSNPTAFNELKKK---------------------QDLLLLLLSVLAGCVRCTHPPFPGGEDRVKLMVQ----------------------------------------ALQGLFLLG---------VRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEVDVFMAKLQVLNLLLDMPGGFVEVLLEHGCLPRVVQLVELQLVRQEFQDDGVDAAAELTPGLLVLNKMMLASEESKMAVKRAIFPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLC---ADEEEFTT--------------RCGFGNAVNTLRLRGVI 452
            +W   L  F+S H  +  +   CG   K  +V  V++       +  + R+      ++A AL AA++LLRE +G+  LM  EA E Y KAAQE  DA  GF V+   + CL N +  +                      P+                LL  +R A +L+                              A R    + ++   A   +++                         L++L+S+LA CVRC  PPFP G     L  +                                         L+ L+ L           +    E    L    + RLG VL + L L H   + +  KL V+NLL+ MP  +   L E+G LP +V++ ELQL+  EF+ D  D A  L P L VL     ++ E +  +K  IFP E D  W+Q   R           D   A K  +++R+HP DAP G+LRAR +  +T  ES+S+    +LL+ LC   A E+                  R GFG+ V  LR RG++
Sbjct:   22 EWRDALSAFASEHSTSAGILQACGEAAKDKVVAAVLQ------AMQPQKRADAAALSLQAAALSAAKVLLREAQGSAPLMTMEASEVYLKAAQESRDADEGFAVATAGVSCLVNLLVHEAAAPKPVVAANMLVALPRASTAPRSXXXXXXXXXXXXXXXLLGGARPAPLLHNSXXXXXXXXXXXXXXXXXXXXXXXXXXXLAARALYRLCATRAPAAAVVREGCAXXXXXXXXXXXXXAGTGDCGKTLVILVSLLAWCVRCEDPPFPQGAGVAPLATEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEVLKLLYFLASTGAVDVERAQGAAREVITVLGQALLLRLGQVLAEALLLPHDRAEAYECKLHVVNLLMHMPATYALYLSENGILPSLVRITELQLLACEFEADTFDPAVGLAPILAVLAAAAGSAAEPRRILKALIFPAETDAQWEQYQRRP-------AAQDEAEA-KAERERRMHPADAPPGSLRARLIACLTMVESTSRRFAGELLWALCEGSAGEDXXXXXXXXXXXXXXXXXYRVGFGSGVGLLRTRGLL 579          
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2XIN1_9STRA)

HSP 1 Score: 136 bits (343), Expect = 3.940e-31
Identity = 104/353 (29.46%), Postives = 176/353 (49.86%), Query Frame = 0
Query:  134 VWDQPKGQIYFVQLGGLDMLVGLL--QASRQASVLYFACRIFNVVGS------SNPTAFNELKKKQ----------DLLLLLLSVLAGCVRCTHPPFPG---GEDRVKLMVQALQGLFLL-------GVRFTPEEKKKALEGDTMKRLGYVLVDILHLDHAEVDVFMAKLQVLNLLLDMPGGFVEVLLEHGCLPRVVQLVELQLVRQEFQDDGVDA--AAELTPGLLVLNKMMLASEESKMAVKRAIFPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGVISVP 455
            VW     Q     + G+ +L+ LL  + S  A +L     + N++GS         TA  EL +K+          D+  +L+  L   ++ + P FPG    + R  L ++ L+ L+ L         R +  E ++    D MK++G +L  IL+L +    V+  KL  +NLL+D P  + ++LL +G +P ++ +++LQ+ +   ++ G     A  + P L V+N+   A+   +  VK  +FP   D      ++ E+ +  +  G            + + P+DAPKGTLR   ++ MTATES+SK   S+LL+ LC AD  EF  R GFGNAV+ L ++G++ +P
Sbjct:  270 VWSTKARQELIDSVNGIPILMDLLLSKVSSTALLLSIVRNVHNLIGSVPGVVNKMDTAIEELIEKRAPDDFVKGGTDITSVLVETLTWTIK-SEPSFPGDASSDRRADLALEILRVLYALRNGQIAGSQRGSFSEIQEKRIEDNMKKMGALLCAILNLPNENKQVYDVKLAAINLLMDAPIEYAQILLTNGNIPSLLMILDLQVTKVVVEEGGAKTSNATSIIPILAVMNRFSAANPCIQNIVKEDVFPTNHDDGTVDEVKTEEMDNEAPGG------------RNMRPMDAPKGTLRYNIIQLMTATESNSKRLASELLWTLCDADPNEFVRRTGFGNAVHMLGMKGLVKLP 609          
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2G9N3_9STRA)

HSP 1 Score: 97.1 bits (240), Expect = 4.990e-20
Identity = 59/152 (38.82%), Postives = 86/152 (56.58%), Query Frame = 0
Query:  307 LQLVRQEFQDDGV--DAAAELTPGLLVLNKMMLASEESKMAVKRAIFPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKD-KRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCADE-EEFTTRCGFGNAVNTLRLRGVISV 454
            L  + +E   DG   D    + P ++ L K+  ASE++K  +K  +FPP+AD+ WK+RL  +K E   +TG+D     K  +D +R+HPVDAP G+LR    K +   E  +K  V +LL  LC     EFT R G+GNAV    ++G IS+
Sbjct:   12 LHTMLRENSPDGRQGDLRTYVLPVVIALKKVAEASEDAKAMMKTLLFPPDADRAWKERLVAQKLEDDEVTGEDEIAERKKERDAERMHPVDAPDGSLRKVLFKVICCIEEHTKRTVCELLLELCDQNMNEFTLRAGYGNAVFMHHIKGAISI 163          
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YKC8_AURAN)

HSP 1 Score: 97.1 bits (240), Expect = 3.590e-18
Identity = 72/204 (35.29%), Postives = 105/204 (51.47%), Query Frame = 0
Query:  253 LGYVLVDILHLDHAEVDVFMAKLQVLNLLLDMPGGFVEVLLEHGCLPRVVQLVELQLVRQEFQDDGVDAAAELTPGLLVLNKMMLASEESKMAVKRAIFPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLC-ADEEEFTTRCGFGNAVNTLRLRGVISVP 455
            +G  L  +L    A  DV  A L  +NLL   P  +   L+E+G +PR+  L+E  L     ++        L P L    K+  AS + K  +K  IFPPEAD VW  +L   K   A   GD+    +K     R+HPVDAP+   R+  LK M   E  +K  V++L++ LC  D +EFT RCG GNA+  L+++ ++ +P
Sbjct:  224 IGVCLRAVLCGARAPYDVPPACLDAVNLLTCAPKTYYCWLVENGAVPRLCNLLEGILNDYVVENKYESPETTLPPLLDAFLKLCAASSKGKRQLKEWIFPPEADAVWMPKLAEAK---ARAKGDEA--LQKEFDAARIHPVDAPRYATRSLLLKLMCDLEPVTKRLVAELVWALCDEDADEFTVRCGVGNAIAFLQIKKLMPMP 422          
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BQP5_9STRA)

HSP 1 Score: 96.3 bits (238), Expect = 1.340e-17
Identity = 77/261 (29.50%), Postives = 132/261 (50.57%), Query Frame = 0
Query:  215 GEDRVKLMVQALQGLFLLGVRFTPEEKKKA------LEGDTMKRLGYVLVDILHLDHAEVDVFMAKLQVLNLLLDMPGGFVEVLLEHGCLPRVVQLVELQLVRQEFQD-------------DGVDAAAELTPGLLVLNKMMLASEESKMAVKRAIFPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTLRARFLKQMTATESSSKTAVSDLLFNLCADEEE-FTTRCGFGNAVNTLRLRGVISVP 455
            GE R  ++V+ L+ ++ L    + E  + +       + +TM  LG +L ++L   +A + ++  KL V+ LL+D+P G+   LL +G +  +V ++ LQL+    +              +G DA+  L P L+VL+K+  A+      V   +FPPE +K  K   + E  +L      D+  A                GTL+   +K MT+T+S+ K   S+LL+ LC + ++ F  + GFGNA+ TL L+G+IS+P
Sbjct:  331 GELRSGVVVEILRFMYTLNFNHSSELLETSSCNIAGADEETMTHLGVILCEMLQFPNANIYLYEIKLGVVKLLMDLPEGYSFYLLLNGGIDPLVDILTLQLLFNTIEGAPISSEWNHRSGTNGNDASVALLPVLVVLSKLCKANTTICSQVHDRVFPPE-EKYEKGGTKEENEKLILEKCPDFSTATFY-------------GTLQDMLIKLMTSTDSNIKRTTSELLWILCNENKDMFVEKTGFGNAIYTLCLKGLISMP 577          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig943.17582.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
Uncharacterized0.000e+096.72protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRM4... [more]
Uncharacterized2.570e-3425.87protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical3.940e-3129.46protein n=1 Tax=Attheya septentrionalis TaxID=4202... [more]
Hypothetical4.990e-2038.82protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized3.590e-1835.29protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.340e-1729.50protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019318Guanine nucleotide exchange factor, Ric8PFAMPF10165Ric8coord: 398..451
e-value: 4.7E-6
score: 25.9
coord: 80..367
e-value: 2.4E-15
score: 56.6
IPR019318Guanine nucleotide exchange factor, Ric8PANTHERPTHR12425SYNEMBRYNcoord: 17..453
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 21..350
e-value: 3.6E-9
score: 37.8
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 76..306

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig943contigEcto-sp9_F_contig943:21545..27555 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig943.17582.1mRNA_Ecto-sp9_F_contig943.17582.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig943 21408..28334 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig943.17582.1 ID=prot_Ecto-sp9_F_contig943.17582.1|Name=mRNA_Ecto-sp9_F_contig943.17582.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=459bp
MEEFLAAAKGGVTSISGDQWVAILRRFSSAHEATWAVSPLCGLDNKRILV
RVVMELLHHTVGLNGRHRSRTLGPGVEAEALLAARILLREREGAERLMDQ
EALETYTKAAQEDGDAACGFRVSLMALKCLNNAVWDQPKGQIYFVQLGGL
DMLVGLLQASRQASVLYFACRIFNVVGSSNPTAFNELKKKQDLLLLLLSV
LAGCVRCTHPPFPGGEDRVKLMVQALQGLFLLGVRFTPEEKKKALEGDTM
KRLGYVLVDILHLDHAEVDVFMAKLQVLNLLLDMPGGFVEVLLEHGCLPR
VVQLVELQLVRQEFQDDGVDAAAELTPGLLVLNKMMLASEESKMAVKRAI
FPPEADKVWKQRLEREKRELASLTGDDYKRAEKLSKDKRVHPVDAPKGTL
RARFLKQMTATESSSKTAVSDLLFNLCADEEEFTTRCGFGNAVNTLRLRG
VISVPGIG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019318Gua_nucleotide_exch_fac_Ric8
IPR011989ARM-like
IPR016024ARM-type_fold