prot_Ecto-sp9_F_contig942.17572.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig942.17572.1
Unique Nameprot_Ecto-sp9_F_contig942.17572.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp9_F_contig942.17572.1 vs.
Match: CCT (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKA9_9PHAE)

HSP 1 Score: 209 bits (531), Expect = 1.330e-62
Identity = 103/114 (90.35%), Postives = 105/114 (92.11%), Query Frame = 0 
Query:    2 MAFCEVESEIDREFDLGVPSDDGFPMNLMSNENITWTVERERGISFDLTALTDPDLKHQGISGGGGG---MPLTPDAGAALLDVMRREVKLEAESGVKESTFGHPFGGQCRPQP 112
            MAFCEVESEIDREFDLGVPSDDGFPMNLMSNENITWTVERERGISFDLTALTDPDL+HQG+SGG      MPLTPDAG ALLDV RREVKLEAESGVKESTFGHPFGGQ RPQP
Sbjct:    1 MAFCEVESEIDREFDLGVPSDDGFPMNLMSNENITWTVERERGISFDLTALTDPDLRHQGVSGGXXXXXXMPLTPDAGGALLDVTRREVKLEAESGVKESTFGHPFGGQFRPQP 114
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig942.17572.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
CCT1.330e-6290.35domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig942contigEcto-sp9_F_contig942:14641..20157 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig942.17572.1mRNA_Ecto-sp9_F_contig942.17572.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig942 14440..20157 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig942.17572.1 ID=prot_Ecto-sp9_F_contig942.17572.1|Name=mRNA_Ecto-sp9_F_contig942.17572.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
MMAFCEVESEIDREFDLGVPSDDGFPMNLMSNENITWTVERERGISFDLT
ALTDPDLKHQGISGGGGGMPLTPDAGAALLDVMRREVKLEAESGVKESTF
GHPFGGQCRPQPRPAPPS
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