prot_Ecto-sp9_F_contig935.17514.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig935.17514.1
Unique Nameprot_Ecto-sp9_F_contig935.17514.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length180
Homology
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G878_ECTSI)

HSP 1 Score: 143 bits (361), Expect = 1.410e-40
Identity = 65/71 (91.55%), Postives = 66/71 (92.96%), Query Frame = 0
Query:    2 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQGIHGNLGGP 72
            VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQ + G  G P
Sbjct:   15 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQ-VAGPAGSP 84          
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDE4_9PHAE)

HSP 1 Score: 135 bits (339), Expect = 6.240e-38
Identity = 61/67 (91.04%), Postives = 63/67 (94.03%), Query Frame = 0
Query:    2 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQ-GIHG 67
            VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQW+ AE EAVRHLHQ G+ G
Sbjct:   10 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWHLAEVEAVRHLHQVGVQG 76          
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G877_ECTSI)

HSP 1 Score: 93.2 bits (230), Expect = 1.010e-21
Identity = 43/63 (68.25%), Postives = 48/63 (76.19%), Query Frame = 0
Query:    1 RVPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQ 63
            RVP N GTWTD EH+GFLRGLEVYG+GN +A+ +FV SRSP QIEAYAQ Y AE E    L Q
Sbjct:    2 RVPLNSGTWTDEEHKGFLRGLEVYGHGNWNAMAVFVLSRSPPQIEAYAQDYMAEKETAHDLQQ 64          
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: MYB (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K163_9PHAE)

HSP 1 Score: 94.0 bits (232), Expect = 1.410e-21
Identity = 43/62 (69.35%), Postives = 50/62 (80.65%), Query Frame = 0
Query:    2 VPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAVRHLHQ 63
            V  N G WTD EHQGFL GLEVYG+GN +AI +FVP+RSP QIEAYA+ YFA GEAV++L Q
Sbjct:   16 VQLNGGRWTDEEHQGFLSGLEVYGHGNWNAIAVFVPTRSPPQIEAYARQYFALGEAVQNLQQ 77          
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPI5_ECTSI)

HSP 1 Score: 87.8 bits (216), Expect = 1.150e-19
Identity = 39/58 (67.24%), Postives = 44/58 (75.86%), Query Frame = 0
Query:    1 RVPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAEGEAV 58
            R+P     WT+ EH GFL GLEVYGYGN DAI +FVPSRS  QIEAYAQ Y A+GE+V
Sbjct:    5 RIPLTTEGWTEDEHNGFLHGLEVYGYGNWDAIAVFVPSRSSPQIEAYAQQYVAQGESV 62          
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: MYB (DNA binding protein/ transcription factor-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G876_ECTSI)

HSP 1 Score: 85.1 bits (209), Expect = 1.360e-18
Identity = 38/48 (79.17%), Postives = 40/48 (83.33%), Query Frame = 0
Query:    7 GTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYFAE 54
            G WTD EHQGFL GLEVYGYGN DAI +FVPSRSP QIEAYAQ Y A+
Sbjct:   24 GRWTDEEHQGFLHGLEVYGYGNWDAIAVFVPSRSPPQIEAYAQQYVAQ 71          
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Match: hypothetical (protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711926E)

HSP 1 Score: 53.9 bits (128), Expect = 1.270e-6
Identity = 23/52 (44.23%), Postives = 34/52 (65.38%), Query Frame = 0
Query:    1 RVPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQWYF 52
            R     GTWT+ EHQ FL+G+E+YG   C+ + + +PSR+  Q+  +AQ YF
Sbjct:    8 RFKLILGTWTEEEHQRFLKGIELYGKKWCEVVKL-IPSRTLSQVRTHAQKYF 58          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig935.17514.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Uncharacterized1.410e-4091.55protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized6.240e-3891.04protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.010e-2168.25protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
MYB1.410e-2169.35protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.150e-1967.24protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
MYB1.360e-1879.17DNA binding protein/ transcription factor-like pro... [more]
hypothetical1.270e-644.23protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=9... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.10.10.60coord: 7..58
e-value: 1.1E-10
score: 43.5
NoneNo IPR availablePANTHERPTHR44042FAMILY NOT NAMEDcoord: 8..57
NoneNo IPR availablePANTHERPTHR44042:SF32coord: 8..57
IPR009057Homeobox-like domain superfamilySUPERFAMILY46689Homeodomain-likecoord: 9..54

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig935contigEcto-sp9_F_contig935:27242..28648 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig935.17514.1mRNA_Ecto-sp9_F_contig935.17514.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig935 27242..28648 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig935.17514.1 ID=prot_Ecto-sp9_F_contig935.17514.1|Name=mRNA_Ecto-sp9_F_contig935.17514.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=180bp
RVPFNCGTWTDVEHQGFLRGLEVYGYGNCDAIGIFVPSRSPLQIEAYAQW
YFAEGEAVRHLHQGIHGNLGGPYYPSRGGGRPDREPSTGCGDGGGGGGGG
GGSSNGGQNGAAARCLGVFGELAAAQEQPASHPASQQQQRTAHRPGIPAV
PDPHLGPMFFDEQAWGEHFNLHDACFGVL*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009057Homeobox-like_sf