prot_Ecto-sp9_F_contig935.17513.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig935.17513.1
Unique Nameprot_Ecto-sp9_F_contig935.17513.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length76
Homology
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BLAST of mRNA_Ecto-sp9_F_contig935.17513.1 vs.
Match: Flagellar (associated protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G879_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 6.580e-23
Identity = 51/51 (100.00%), Postives = 51/51 (100.00%), Query Frame = 0 
Query:   25 RNRKAIERSLQAPRKKVGRPVMFRSRLQKRKVSKNKDMSHGEDLDEIKHLT 75
            RNRKAIERSLQAPRKKVGRPVMFRSRLQKRKVSKNKDMSHGEDLDEIKHLT
Sbjct:  500 RNRKAIERSLQAPRKKVGRPVMFRSRLQKRKVSKNKDMSHGEDLDEIKHLT 550
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BLAST of mRNA_Ecto-sp9_F_contig935.17513.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XXP3_9STRA)

HSP 1 Score: 59.7 bits (143), Expect = 9.240e-9
Identity = 31/51 (60.78%), Postives = 40/51 (78.43%), Query Frame = 0 
Query:   25 RNRKAIERSLQAPRKKVGRPVMFRSRLQKRKVSKNKDMSHGEDLDEIKHLT 75
            RNRK+IERSLQAP+K+ GR VMFRS+ Q+R + ++K     EDLDEIK L+
Sbjct:  235 RNRKSIERSLQAPKKRTGRQVMFRSQPQRRTIREDKTEDTEEDLDEIKFLS 285
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BLAST of mRNA_Ecto-sp9_F_contig935.17513.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9Z950_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 9.320e-8
Identity = 44/75 (58.67%), Postives = 58/75 (77.33%), Query Frame = 0 
Query:    2 KEKKRREXXXXXXXXXXXXXXXXRNRKAIERSLQAPRKKVGRPVMFRSRL-QKRKVSKNKDMSHGEDLDEIKHLT 75
            K K+RRE    XXXXXXXXXXX RNRKA+ER +Q P+++ G+PVM+RS L +K+KV K+K     E+LDE++HLT
Sbjct:  101 KGKQRRELKRAXXXXXXXXXXXERNRKALERCMQPPKRREGKPVMYRSHLVRKKKVEKDKRELTQEELDELRHLT 175
[Close]
BLAST of mRNA_Ecto-sp9_F_contig935.17513.1 vs.
Match: DUF4200 (domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y2D2_AURAN)

HSP 1 Score: 51.2 bits (121), Expect = 1.170e-5
Identity = 27/51 (52.94%), Postives = 38/51 (74.51%), Query Frame = 0 
Query:   25 RNRKAIERSLQAPRKKVGRPVMFRSRLQKRKVSKNKDMSHGEDLDEIKHLT 75
            RNRK+I RS+QAP+K+ GR VMFRS   ++ V + K+    +DLDE+K+LT
Sbjct:  495 RNRKSIARSMQAPKKRTGRQVMFRSAPMRQAVREEKE-EEEDDLDELKYLT 544
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig935.17513.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
Flagellar6.580e-23100.00associated protein n=1 Tax=Ectocarpus siliculosus ... [more]
Hypothetical9.240e-960.78protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Hypothetical9.320e-858.67protein n=1 Tax=Pseudictyota dubia TaxID=2749911 R... [more]
DUF42001.170e-552.94domain-containing protein n=1 Tax=Aureococcus anop... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 2..33
NoneNo IPR availablePANTHERPTHR21683:SF3CILIA AND FLAGELLA ASSOCIATED PROTEIN 100coord: 1..68
NoneNo IPR availablePANTHERPTHR21683UNCHARACTERIZEDcoord: 1..68

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig935contigEcto-sp9_F_contig935:22818..23358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig935.17513.1mRNA_Ecto-sp9_F_contig935.17513.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig935 22818..23358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig935.17513.1 ID=prot_Ecto-sp9_F_contig935.17513.1|Name=mRNA_Ecto-sp9_F_contig935.17513.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=76bp
EKEKKRREKKRAEQQALQERMQEERNRKAIERSLQAPRKKVGRPVMFRSR
LQKRKVSKNKDMSHGEDLDEIKHLT*
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