prot_Ecto-sp9_F_contig9349.17507.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9349.17507.1
Unique Nameprot_Ecto-sp9_F_contig9349.17507.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length159
Homology
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: RNA (helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1I0_ECTSI)

HSP 1 Score: 306 bits (783), Expect = 6.250e-98
Identity = 153/155 (98.71%), Postives = 154/155 (99.35%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            PYSRKYYDILEKRKKLPVHQFL+DLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDV LGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK
Sbjct:   37 PYSRKYYDILEKRKKLPVHQFLDDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVNLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 191          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: RNA (helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBU4_9STRA)

HSP 1 Score: 258 bits (660), Expect = 1.080e-79
Identity = 131/155 (84.52%), Postives = 139/155 (89.68%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            PYS+KYY+IL KRK LPVHQFL++L+ KV  NQ VVVEGETGSGKTTQIPQFLVEAGYG +G+  VACTQPRRVAAMSIA RVSDEMDV LGDIVGYSIRFEI    RTILNFMTDGMLLREAMNDP LAKYKCIVLDEAHERTLATDVLMGL+K
Sbjct:   39 PYSQKYYEILTKRKTLPVHQFLQELLSKVAANQVVVVEGETGSGKTTQIPQFLVEAGYGQVGQFSVACTQPRRVAAMSIAQRVSDEMDVTLGDIVGYSIRFEICTSQRTILNFMTDGMLLREAMNDPMLAKYKCIVLDEAHERTLATDVLMGLLK 193          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L043_9PHAE)

HSP 1 Score: 239 bits (611), Expect = 1.930e-72
Identity = 119/123 (96.75%), Postives = 122/123 (99.19%), Query Frame = 0
Query:   29 VKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLM 151
            VKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDV+LGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATD ++
Sbjct:    6 VKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVQLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDEVL 128          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXE1_9STRA)

HSP 1 Score: 216 bits (550), Expect = 1.180e-69
Identity = 107/147 (72.79%), Postives = 125/147 (85.03%), Query Frame = 0
Query:    9 ILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            IL+KR+KLP HQ+++D+  KV  +Q V++EG TGSGKTTQIPQ LV AGY  +GE CVACTQPRRVAAMSIANRV+DEMDV LG+ VGY+IRFE  +GPRT+L F+TDGMLLREA  DP L KY CIVLDEAHERTL+TDVLMGL+K
Sbjct:    1 ILKKREKLPGHQYIDDVNAKVAEHQVVIIEGATGSGKTTQIPQALVHAGYSKVGEYCVACTQPRRVAAMSIANRVADEMDVVLGEEVGYNIRFEDNSGPRTVLKFLTDGMLLREAQTDPDLNKYGCIVLDEAHERTLSTDVLMGLLK 147          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: Uncharacterized (protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DBT4_9STRA)

HSP 1 Score: 230 bits (587), Expect = 3.490e-69
Identity = 118/155 (76.13%), Postives = 134/155 (86.45%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            PYS KY+DIL KR+ LPV++FL+DL+ KVK NQ VVVEGETGSGKTTQIPQFLV+AGY   G  CVACTQPRRVAAMSIA RVS+EMDV +G+ VGY+IRFE  +GP+T+L F+TDGMLLREAM DP L KYK IVLDEAHERTLATDVLMGL+K
Sbjct:   54 PYSSKYHDILAKRRNLPVYEFLDDLLAKVKKNQVVVVEGETGSGKTTQIPQFLVDAGYTRDGY-CVACTQPRRVAAMSIAKRVSEEMDVTMGEEVGYTIRFEDCSGPKTVLKFLTDGMLLREAMFDPMLKKYKVIVLDEAHERTLATDVLMGLLK 207          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: RNA (helicase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZQN2_9STRA)

HSP 1 Score: 228 bits (582), Expect = 3.040e-68
Identity = 118/155 (76.13%), Postives = 132/155 (85.16%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            PYSR+Y+DIL  RK+LPV+ FLE L+D VKNNQTVVVEGETGSGKTTQIPQFLV+  Y   G  CVACTQPRRVAAMSIA RV+DEMDV+LG+ VGYSIRFE   GP T+L FMTDGMLLREAM+DPFL +   IVLDEAHERTL+TDVLMGL+K
Sbjct:   46 PYSRRYHDILRGRKELPVYGFLERLLDAVKNNQTVVVEGETGSGKTTQIPQFLVKD-YARRGSKCVACTQPRRVAAMSIAQRVADEMDVQLGEEVGYSIRFEDTTGPNTLLKFMTDGMLLREAMSDPFLERMSVIVLDEAHERTLSTDVLMGLLK 199          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: RNA (helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813AXB8_9DINO)

HSP 1 Score: 215 bits (547), Expect = 8.570e-66
Identity = 110/156 (70.51%), Postives = 127/156 (81.41%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEG-CVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            PY+ +YYDILEKRK LPV  FL+DL   V+ NQ V+VEGETGSGKTTQIPQFLV AG+G   +G  +ACTQPRRVAAMS+A RV+DEMDV +G+ VGYS RFE     RT+L FMTDGMLLREAM DP L++Y  I+LDEAHERTLATDVLMGL+K
Sbjct:    9 PYTARYYDILEKRKALPVWSFLDDLQKNVEENQVVIVEGETGSGKTTQIPQFLVNAGFG---KGKVIACTQPRRVAAMSVAQRVADEMDVMIGEEVGYSFRFEDVTSERTVLKFMTDGMLLREAMTDPKLSRYSVIILDEAHERTLATDVLMGLLK 161          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: RNA (helicase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UZ15_9STRA)

HSP 1 Score: 222 bits (565), Expect = 9.630e-66
Identity = 115/155 (74.19%), Postives = 126/155 (81.29%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLIK 155
            PYS KYY+IL KR  LPV+ FLEDL  KV+ NQ V+VEGETGSGKTTQIPQFLVE GY   G   VACTQPRRVAAMSIA RV++EMDV +G+ VGY+IRFE      TIL FMTDGMLLREAM DPFL KYK IVLDEAHERTL+TDVLMGL+K
Sbjct:   52 PYSAKYYEILRKRTTLPVYDFLEDLKAKVRGNQVVIVEGETGSGKTTQIPQFLVEDGYAKEGYYSVACTQPRRVAAMSIAQRVAEEMDVVMGEHVGYTIRFEDCTSQNTILKFMTDGMLLREAMADPFLEKYKVIVLDEAHERTLSTDVLMGLVK 206          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: DEAH-box (nuclear pre-mRNA splicing factor (Fragment) n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7F502_9STRA)

HSP 1 Score: 211 bits (536), Expect = 1.270e-64
Identity = 105/155 (67.74%), Postives = 129/155 (83.23%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFE-IKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLI 154
            P+S++YYDIL+KR KLPV+QF ++L+ K+  NQ++VVEGETGSGKTTQIPQFL+EAG    G+ CVACTQPRRVAA SIA RV+DEMDV LG  VGY+IRFE + +   T+L F+TDGMLLREAM+DP L +Y  IVLDE HERTL+TDV+MGL+
Sbjct:   30 PFSQRYYDILDKRTKLPVYQFKDELIKKILENQSIVVEGETGSGKTTQIPQFLLEAGLADQGKTCVACTQPRRVAATSIAQRVADEMDVVLGKEVGYTIRFEDVTDKYNTVLKFLTDGMLLREAMHDPLLTRYSAIVLDECHERTLSTDVIMGLL 184          
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID=A0A448Z4P0_9STRA)

HSP 1 Score: 218 bits (555), Expect = 2.340e-64
Identity = 112/155 (72.26%), Postives = 131/155 (84.52%), Query Frame = 0
Query:    1 PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIPQFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIRFEIKNGPR-TILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVLMGLI 154
            PYS+KYYDIL+KR KLPV+QF ++L+ KV  NQ+VVVEGETGSGKTTQIPQFL+EAG    G+ CVACTQPRRVAA SIA RV+DEMDV+LG  VGY+IRFE  + PR T+L F TDGMLLREAM+DP L++Y  IVLDE HERTLATDV+MGL+
Sbjct:   29 PYSQKYYDILDKRIKLPVYQFKDNLIKKVLENQSVVVEGETGSGKTTQIPQFLLEAGLAEQGKTCVACTQPRRVAATSIAQRVADEMDVELGREVGYTIRFEDVSDPRSTVLKFCTDGMLLREAMHDPLLSRYSAIVLDECHERTLATDVIMGLL 183          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9349.17507.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
RNA6.250e-9898.71helicase n=1 Tax=Ectocarpus siliculosus TaxID=2880... [more]
RNA1.080e-7984.52helicase n=1 Tax=Tribonema minus TaxID=303371 RepI... [more]
Uncharacterized1.930e-7296.75protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Hypothetical1.180e-6972.79protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=... [more]
Uncharacterized3.490e-6976.13protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID... [more]
RNA3.040e-6876.13helicase n=1 Tax=Pelagomonas calceolata TaxID=3567... [more]
RNA8.570e-6670.51helicase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985... [more]
RNA9.630e-6674.19helicase n=1 Tax=Fibrocapsa japonica TaxID=94617 R... [more]
DEAH-box1.270e-6467.74nuclear pre-mRNA splicing factor (Fragment) n=1 Ta... [more]
Uncharacterized2.340e-6472.26protein n=2 Tax=Pseudo-nitzschia TaxID=41953 RepID... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 14..159
e-value: 1.8E-6
score: 37.5
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 26..159
score: 14.854
NoneNo IPR availableGENE3D3.40.50.300coord: 1..159
e-value: 4.9E-67
score: 227.4
NoneNo IPR availablePANTHERPTHR18934:SF109DHX15 ORTHOLOG, ISOFORM Acoord: 1..156
NoneNo IPR availablePANTHERPTHR18934ATP-DEPENDENT RNA HELICASEcoord: 1..156
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 13..156

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9349contigEcto-sp9_F_contig9349:373..2564 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9349.17507.1mRNA_Ecto-sp9_F_contig9349.17507.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9349 373..2565 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9349.17507.1 ID=prot_Ecto-sp9_F_contig9349.17507.1|Name=mRNA_Ecto-sp9_F_contig9349.17507.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=159bp
PYSRKYYDILEKRKKLPVHQFLEDLMDKVKNNQTVVVEGETGSGKTTQIP
QFLVEAGYGAIGEGCVACTQPRRVAAMSIANRVSDEMDVKLGDIVGYSIR
FEIKNGPRTILNFMTDGMLLREAMNDPFLAKYKCIVLDEAHERTLATDVL
MGLIKARER
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR027417P-loop_NTPase