prot_Ecto-sp9_F_contig9342.17504.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9342.17504.1
Unique Nameprot_Ecto-sp9_F_contig9342.17504.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length87
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9342.17504.1 vs.
Match: Bromodomain-containing (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBK0_ECTSI)

HSP 1 Score: 127 bits (318), Expect = 4.210e-32
Identity = 64/66 (96.97%), Postives = 64/66 (96.97%), Query Frame = 0 
Query:    1 IPPELKTLPAKLLPRFVDLRRGKAADVVKTTPEEGAATLSSALSPSWLRRLYRTPRDLAGDESLSS 66
            IPPELKTLPAKLLPRF DLRRGKAADVVKTTPEEGAATLSSALSPSWLRRLYRTPRD AGDESLSS
Sbjct: 1470 IPPELKTLPAKLLPRFADLRRGKAADVVKTTPEEGAATLSSALSPSWLRRLYRTPRDRAGDESLSS 1535
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9342.17504.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Bromodomain-containing4.210e-3296.97protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9342contigEcto-sp9_F_contig9342:3661..4301 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9342.17504.1mRNA_Ecto-sp9_F_contig9342.17504.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9342 3661..4301 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9342.17504.1 ID=prot_Ecto-sp9_F_contig9342.17504.1|Name=mRNA_Ecto-sp9_F_contig9342.17504.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=87bp
IPPELKTLPAKLLPRFVDLRRGKAADVVKTTPEEGAATLSSALSPSWLRR
LYRTPRDLAGDESLSSSSSSSSSSSDSEDSGSDSDSD
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