prot_Ecto-sp9_F_contig9332.17494.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9332.17494.1
Unique Nameprot_Ecto-sp9_F_contig9332.17494.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length208
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9332.17494.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FP07_ECTSI)

HSP 1 Score: 250 bits (639), Expect = 4.150e-79
Identity = 199/207 (96.14%), Postives = 199/207 (96.14%), Query Frame = 0 
Query:    1 RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGTGXXXXXXXXAGIHMFPSTSPVSPTRRDDVVSARSMRLHTRTSDEAHRLGFVKRHLHELLRLASSHPAALLATPASLASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPDLSRDEFESLGFLLTGGASLEAERAPGVSLADLCPLWGGQGG 207
            RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGT XXXXXXXXAGIHMFPSTSPVSPTR      ARSMRLHTRTSDEAHRLGFVKRHLHELLRLASSHPAALLATPASLASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPDLSRDEFESLGFLLTGGASLEAERAPGVSLADLCPLWG QGG
Sbjct:  166 RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGTXXXXXXXXXAGIHMFPSTSPVSPTR------ARSMRLHTRTSDEAHRLGFVKRHLHELLRLASSHPAALLATPASLASLAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDEPDLSRDEFESLGFLLTGGASLEAERAPGVSLADLCPLWGDQGG 366
[Close]
BLAST of mRNA_Ecto-sp9_F_contig9332.17494.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6Y6_9PHAE)

HSP 1 Score: 108 bits (269), Expect = 1.800e-25
Identity = 64/65 (98.46%), Postives = 65/65 (100.00%), Query Frame = 0 
Query:    1 RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGTGXXXXXXXXAGIHMFPSTSPVSPTRRDDVV 65
            RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGTGXXXXXXXXAGIHMFPSTSPVSPTRRDDV+
Sbjct:  166 RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGTGXXXXXXXXAGIHMFPSTSPVSPTRRDDVL 230
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9332.17494.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized4.150e-7996.14protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.800e-2598.46protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9332contigEcto-sp9_F_contig9332:40..3463 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9332.17494.1mRNA_Ecto-sp9_F_contig9332.17494.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9332 40..3463 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9332.17494.1 ID=prot_Ecto-sp9_F_contig9332.17494.1|Name=mRNA_Ecto-sp9_F_contig9332.17494.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=208bp
RAGGPAISPGRVAHGRGATSPNSLAAPSSPRGFGTGTSAAAAAAAGIHMF
PSTSPVSPTRRDDVVSARSMRLHTRTSDEAHRLGFVKRHLHELLRLASSH
PAALLATPASLASLAAASSSSSKTLQQQTQAVAEAGAAALTRESKPTSGG
TASAGGSGSEEEDEPDLSRDEFESLGFLLTGGASLEAERAPGVSLADLCP
LWGGQGG*
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