prot_Ecto-sp9_F_contig9324.17488.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9324.17488.1
Unique Nameprot_Ecto-sp9_F_contig9324.17488.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length118
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9324.17488.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTJ4_ECTSI)

HSP 1 Score: 226 bits (577), Expect = 5.280e-72
Identity = 112/118 (94.92%), Postives = 116/118 (98.31%), Query Frame = 0 
Query:    1 MASTLTVQSGVLEGDVIVCGSTTGGLFEDPGGVFESGSSGEAEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYLVARLNGHDGSETW 118
            MASTLTVQSGVLEGDVIVCGSTTGGLFE+PGGVFESGSSGE EE GNKGTKAFCA+LAASDGHVVWGTRFKGGSN+EILAAAVDPLTGDVFAAGYISEAGGSDY+VARLNGHDGSETW
Sbjct:  137 MASTLTVQSGVLEGDVIVCGSTTGGLFENPGGVFESGSSGETEEKGNKGTKAFCARLAASDGHVVWGTRFKGGSNNEILAAAVDPLTGDVFAAGYISEAGGSDYVVARLNGHDGSETW 254
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BLAST of mRNA_Ecto-sp9_F_contig9324.17488.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KWN4_9PHAE)

HSP 1 Score: 224 bits (572), Expect = 2.490e-68
Identity = 111/118 (94.07%), Postives = 114/118 (96.61%), Query Frame = 0 
Query:    1 MASTLTVQSGVLEGDVIVCGSTTGGLFEDPGGVFESGSSGEAEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYLVARLNGHDGSETW 118
            MASTLTVQSGVLEGDVIVCGSTTGGLFEDPGGVFES SS E E+TGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDY+V RLNGHDG+ETW
Sbjct:  133 MASTLTVQSGVLEGDVIVCGSTTGGLFEDPGGVFESSSSRETEDTGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAGGSDYVVVRLNGHDGTETW 250
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BLAST of mRNA_Ecto-sp9_F_contig9324.17488.1 vs.
Match: Uncharacterized (protein n=1 Tax=Thermocrinis ruber TaxID=75906 RepID=A0A7C5SZC0_9AQUI)

HSP 1 Score: 52.4 bits (124), Expect = 2.040e-5
Identity = 38/111 (34.23%), Postives = 53/111 (47.75%), Query Frame = 0 
Query:   14 GDVIVCGSTTGGLFEDPGGVFESGSSGEAEETGNKGTKAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYI--------------SEAGGSDYLVARLN 110
            G++ V G T    F         G++G A+   N G  AF A+L  S   ++  T   GG +DE LA A+ P TGDV+ AG                +++GGSD  VARL+
Sbjct:  527 GEIYVAGRTASTNFP--------GTTGGAQAGNNGGFDAFVARLNPSLTQILQSTYLGGGDDDEALAIAIHPTTGDVYVAGKTLSPDFPKTAGGARENKSGGSDAFVARLS 629
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9324.17488.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
Uncharacterized5.280e-7294.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.490e-6894.07protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.040e-534.23protein n=1 Tax=Thermocrinis ruber TaxID=75906 Rep... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9324contigEcto-sp9_F_contig9324:1721..4509 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9324.17488.1mRNA_Ecto-sp9_F_contig9324.17488.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9324 1721..4533 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9324.17488.1 ID=prot_Ecto-sp9_F_contig9324.17488.1|Name=mRNA_Ecto-sp9_F_contig9324.17488.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=118bp
MASTLTVQSGVLEGDVIVCGSTTGGLFEDPGGVFESGSSGEAEETGNKGT
KAFCAKLAASDGHVVWGTRFKGGSNDEILAAAVDPLTGDVFAAGYISEAG
GSDYLVARLNGHDGSETW
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