prot_Ecto-sp9_F_contig9320.17485.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9320.17485.1
Unique Name	prot_Ecto-sp9_F_contig9320.17485.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	528

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9320.17485.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ22_ECTSI)

HSP 1 Score: 771 bits (1991), Expect = 1.220e-274
Identity = 482/532 (90.60%), Postives = 487/532 (91.54%), Query Frame = 0

Query:    1 RLSVLAVQGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEEDNDAPSYQEDGRSLQSPVIAPGQQLLARDGGGKXXXXXXXXXXPHDGSREWIHSGRLTHTGIFVRPPRPKSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGSRSGPLEAAXXXXXXX--DAATGRDGGEGVGVEAEAATGDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQSLDFRDFLPQIAWLGLSPDPVRPLPGGPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRREPGGRLGVAHPPSPDSGVNAWWKNKTPHQWGGXXXXXXXXADGRG---SRTGAGEAPLLPKRHAFLRRSHPAATTATYASSRSGTTHNNGDARTXXXXXXXXXXXXXXXRAGASAAGVDEFWPRTQILGMNGGRLPRRVRQVPINRPLTAPCGKVGRRRVRTRGGNKGGANRP 527
            R++    +GDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEEDNDAPSYQEDGRSL+SPVIAPGQQLLARDGGGK XXXXXXXXXPHDGSREWIHSGRL HTGIFVRPPRPKSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX           XXXXXXX  DAATGRDGGEGVGVEAEAA GDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQ LDFRDFLPQIAWLGLSPDPVRPLPG PGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRR PGG LGVAHPPS DSGVN WWKNKTPHQ GG XXXXXXX        SRT AGEAPLLPKRHAFLRRSHP ATTATYASSRSGTT NNGDARTXXXXXXXXXXXXXXX     AAGVDEFWPRTQILGMNGGRLP RVRQVPI+RPLTAPCGKVGRRRVRTRGGNKGGANRP
Sbjct:  140 RMTKAIAEGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVVDTLPPRPTTVIVPVDEGEEDNDAPSYQEDGRSLESPVIAPGQQLLARDGGGKGXXXXXXXXXPHDGSREWIHSGRLAHTGIFVRPPRPKSRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDAATGRDGGEGVGVEAEAAAGDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCEPREPLATPEDLLLDTIDPRSRLGQPLDFRDFLPQIAWLGLSPDPVRPLPGSPGDGTLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWASGGRRRRGPGGGLGVAHPPSLDSGVNTWWKNKTPHQRGGRXXXXXXXXXXXXXXXSRTEAGEAPLLPKRHAFLRRSHPTATTATYASSRSGTTRNNGDARTXXXXXXXXXXXXXXXXXXXXAAGVDEFWPRTQILGMNGGRLPTRVRQVPIDRPLTAPCGKVGRRRVRTRGGNKGGANRP 671

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9320.17485.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9320.17485.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
Uncharacterized	1.220e-274	90.60	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 27..47

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9320	contig	Ecto-sp9_F_contig9320:1588..5135 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9320.17485.1	mRNA_Ecto-sp9_F_contig9320.17485.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9320 1588..5135 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9320.17485.1 ID=prot_Ecto-sp9_F_contig9320.17485.1|Name=mRNA_Ecto-sp9_F_contig9320.17485.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=528bp
RLSVLAVQGDERTEALQDTLRNEGSINKAVAEELDMLLVEAMNLRREFVV
DTLPPRPTTVIVPVDEGEEDNDAPSYQEDGRSLQSPVIAPGQQLLARDGG
GKGGGSGGGGGGPHDGSREWIHSGRLTHTGIFVRPPRPKSRGGGGGGGGS
SNRNPPSSPQESSSDQQRNSGDSSSRGSRSGPLEAAAAAAAAADAATGRD
GGEGVGVEAEAATGDYGGGSKGRSEGEDAWSCCGKPVLSAGRGCEPREPL
ATPEDLLLDTIDPRSRLGQSLDFRDFLPQIAWLGLSPDPVRPLPGGPGDG
TLRPHTAPERLTDAAGQWSPQGWAGGDANREYDRRASRSRNGGLVGGVWA
SGGRRRREPGGRLGVAHPPSPDSGVNAWWKNKTPHQWGGGGGGGGGGADG
RGSRTGAGEAPLLPKRHAFLRRSHPAATTATYASSRSGTTHNNGDARTGG
GGESTSTAAAAAARAGASAAGVDEFWPRTQILGMNGGRLPRRVRQVPINR
PLTAPCGKVGRRRVRTRGGNKGGANRP*