prot_Ecto-sp9_F_contig9312.17475.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9312.17475.1
Unique Nameprot_Ecto-sp9_F_contig9312.17475.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length329
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9312.17475.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC7_ECTSI)

HSP 1 Score: 405 bits (1042), Expect = 6.100e-130
Identity = 279/318 (87.74%), Postives = 283/318 (88.99%), Query Frame = 0 
Query:   11 KVWSVLLKSLEGRETPVELLRMADAVLGRPGRQAGGTREGAGAGLDVGRMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLRELLRALPSANQXXXXXXXXXXXXXXXXXXXXXXSGAINATTGSDDALTDDRSPEPSGSTSPEXXXXXXXXTCPEISLKTTXXXXXXXXXXXXXXXXXXXXXXKERSPTVSQERLAENSRDFPSSPTAPLVVQGLDRTEADYLRRGAERVLGQWGRAEQEGWAEPDDNAIEWGRSTSYLNTYATSGGXXXXXXXXXXXXKSAGSRGNRLFSRQDLFSVG 328
            KVWSVLLKSLEGRETPVELLRMADAVLGRPGRQAGGTREGAGAGLDVG MRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLRELLRALPSANQ   XXXXXXXXXXXXXXXXXXXSGAI+ATTGSDDA TDDRSPE SGSTSP XXXXXXXX   EISLKTT       XXXXXXXXXX     +ER PT+SQER AENSRDF SSPTAPLVVQGLDRTEADYLRRGAERVLGQWGRAEQEGWAEPDDN IEWGRSTSYLNT ATSGG XXXXXXXXXX KSAGSRGNRLFS +     G
Sbjct:  492 KVWSVLLKSLEGRETPVELLRMADAVLGRPGRQAGGTREGAGAGLDVGTMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLRELLRALPSANQRAAXXXXXXXXXXXXXXXXXXXSGAISATTGSDDASTDDRSPELSGSTSPXXXXXXXXXXXXEISLKTTSPGPSSEXXXXXXXXXXGKKSSQERPPTISQERPAENSRDFSSSPTAPLVVQGLDRTEADYLRRGAERVLGQWGRAEQEGWAEPDDNTIEWGRSTSYLNTCATSGGTXXXXXXXXXX-KSAGSRGNRLFSSRSRQPAG 808
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BLAST of mRNA_Ecto-sp9_F_contig9312.17475.1 vs.
Match: ORC3_N (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMQ2_9PHAE)

HSP 1 Score: 315 bits (808), Expect = 2.420e-98
Identity = 192/263 (73.00%), Postives = 198/263 (75.29%), Query Frame = 0 
Query:   11 KVWSVLLKSLEGRETPVELLRMADAVLGRPGRQAGGTREGAGAGLDVGRMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLRELLRALPSANQXXXXXXXXXXXXXXXXXXXXXXSGAINATTGSDDALTDDRSPEPSGSTSPEXXXXXXXXTCPEISLKTTXXXXXXXXXXXXXXXXXXXXXXKERSPTVSQERLAENSRDFPSSPTAPLVVQGLDRTEADYLRRGAERVLGQWGRAEQEGWAE 273
            KVW+VLLKSLEGRE PVELLRM DAVLGRPGRQ GG REGAGAGLDVGRMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLL ELL ALPSA+Q                      SGAI+ TTGSD ALTD RSPE SGSTSPE    XXXXTCPEIS KTT                      +ERSPT+SQE  A NSRDF SSPTAPLVV GLDR EADYLRRGAERVLGQWGRAE+EGWAE
Sbjct:  493 KVWNVLLKSLEGRENPVELLRMTDAVLGRPGRQ-GGPREGAGAGLDVGRMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYLLPGEVKGLLHELLCALPSADQSSASSAATDPRATAAADADGE-SGAISNTTGSDYALTDGRSPERSGSTSPERFAEXXXXTCPEISRKTTSPGPASERSPTRREISGKKAS-QERSPTLSQELSAGNSRDFCSSPTAPLVVHGLDRMEADYLRRGAERVLGQWGRAEKEGWAE 752
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9312.17475.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized6.100e-13087.74protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
ORC3_N2.420e-9873.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 10..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..328
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..9
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..14
score: 0.472

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9312contigEcto-sp9_F_contig9312:1385..5262 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9312.17475.1mRNA_Ecto-sp9_F_contig9312.17475.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9312 1385..5262 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9312.17475.1 ID=prot_Ecto-sp9_F_contig9312.17475.1|Name=mRNA_Ecto-sp9_F_contig9312.17475.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=329bp
MLFFVFFLPEKVWSVLLKSLEGRETPVELLRMADAVLGRPGRQAGGTREG
AGAGLDVGRMRQRAVKLGSSVRILGLLSASKKSRRYYAELKEVSEALAYL
LPGEVKGLLRELLRALPSANQSAAAAVAATDPSAAADADADAESGAINAT
TGSDDALTDDRSPEPSGSTSPERSAERSGNTCPEISLKTTSPGPSSERSP
TKRREISGKKTSKERSPTVSQERLAENSRDFPSSPTAPLVVQGLDRTEAD
YLRRGAERVLGQWGRAEQEGWAEPDDNAIEWGRSTSYLNTYATSGGTSGG
GGGGGGGGKSAGSRGNRLFSRQDLFSVG*
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