prot_Ecto-sp9_F_contig9307.17470.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9307.17470.1
Unique Nameprot_Ecto-sp9_F_contig9307.17470.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length137
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9307.17470.1 vs.
Match: Survivin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMN8_ECTSI)

HSP 1 Score: 143 bits (360), Expect = 6.700e-37
Identity = 87/100 (87.00%), Postives = 88/100 (88.00%), Query Frame = 0 
Query:    1 TKPTAGGPPVPPSQDSXXXXXQSGKTMGFGLALGVSSKKAAGADEAAAGKGGVDADDDDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMETRGNG 100
            TKPTAGGPPV      XXXXX  GKTMGFGLALGV SKKAAGADEAAAGKGGV  DD+DGALTDLLLAAVQDVEDVVDASFVEELENASITRPME RGNG
Sbjct:  837 TKPTAGGPPVXXXXXXXXXXXXXGKTMGFGLALGVFSKKAAGADEAAAGKGGVGDDDNDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMEIRGNG 936
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BLAST of mRNA_Ecto-sp9_F_contig9307.17470.1 vs.
Match: UBC (core domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJC0_9PHAE)

HSP 1 Score: 142 bits (358), Expect = 1.200e-36
Identity = 82/101 (81.19%), Postives = 84/101 (83.17%), Query Frame = 0 
Query:    1 TKPTAGGPPVPPSQDSXXXXXQSGKTMGFGLALGVSSKKAAGADEAAAGKGGVDADDDDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMETRGNGK 101
            TKPTAGGPPVP SQ+S     QSGKTMGF L LGVSSKKA GADEAAA  GGV      GALTDLLLAAVQDV+DVVDASFVEELENASITRPMETRGNGK
Sbjct:  468 TKPTAGGPPVPASQESSSSSSQSGKTMGFALPLGVSSKKAPGADEAAARTGGVGDXXXXGALTDLLLAAVQDVKDVVDASFVEELENASITRPMETRGNGK 568
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9307.17470.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Survivin6.700e-3787.00n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
UBC1.200e-3681.19core domain-containing protein n=1 Tax=Ectocarpus ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9307contigEcto-sp9_F_contig9307:299..2379 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9307.17470.1mRNA_Ecto-sp9_F_contig9307.17470.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9307 299..2381 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9307.17470.1 ID=prot_Ecto-sp9_F_contig9307.17470.1|Name=mRNA_Ecto-sp9_F_contig9307.17470.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=137bp
TKPTAGGPPVPPSQDSSSSSSQSGKTMGFGLALGVSSKKAAGADEAAAGK
GGVDADDDDGALTDLLLAAVQDVEDVVDASFVEELENASITRPMETRGNG
KGKGGPTTRSSTAAAAAGIGGSAAPARGRGSKGSSSR
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