prot_Ecto-sp9_F_contig9302.17466.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9302.17466.1
Unique Nameprot_Ecto-sp9_F_contig9302.17466.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length158
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9302.17466.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJF2_9PHAE)

HSP 1 Score: 110 bits (275), Expect = 3.800e-25
Identity = 97/125 (77.60%), Postives = 97/125 (77.60%), Query Frame = 0 
Query:   10 RSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPAEKRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASAAGRVPYDRTTTVG------------YSRLLARFTKGPSPRGGRQK 122
            RSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCST SFA PAEKR XXXXXXXXXX      XXXXXXXXXXXXXX      VPYDRTTTVG            YSRLLARFTKGPSPRG RQK
Sbjct:  125 RSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTHSFAVPAEKRSXXXXXXXXXXGEKDGRXXXXXXXXXXXXXXXXXXXGVPYDRTTTVGGEGREEKITVLGYSRLLARFTKGPSPRGDRQK 249
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BLAST of mRNA_Ecto-sp9_F_contig9302.17466.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPX7_ECTSI)

HSP 1 Score: 84.7 bits (208), Expect = 2.370e-17
Identity = 47/47 (100.00%), Postives = 47/47 (100.00%), Query Frame = 0 
Query:    9 HRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPAEKR 55
            HRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPAEKR
Sbjct:   84 HRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAAPAEKR 130
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9302.17466.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized3.800e-2577.60protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.370e-17100.00protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9302contigEcto-sp9_F_contig9302:4156..5327 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9302.17466.1mRNA_Ecto-sp9_F_contig9302.17466.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9302 4156..5327 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9302.17466.1 ID=prot_Ecto-sp9_F_contig9302.17466.1|Name=mRNA_Ecto-sp9_F_contig9302.17466.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=158bp
QSPRQQQQHRSALSGRRAVAVQTAAAHVTASPGTGVLTSESSCSTPSFAA
PAEKRSSSSSGGGAAAGEKDGRGGGGSGRRGPVGGGASAAGRVPYDRTTT
VGYSRLLARFTKGPSPRGGRQKPPPPPPDRFAVSAAASRELGSGTTITTA
SNLGGSSR
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