prot_Ecto-sp9_F_contig930.17462.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig930.17462.1
Unique Nameprot_Ecto-sp9_F_contig930.17462.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length179
Homology
BLAST of mRNA_Ecto-sp9_F_contig930.17462.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G386_ECTSI)

HSP 1 Score: 239 bits (610), Expect = 4.220e-78
Identity = 157/178 (88.20%), Postives = 158/178 (88.76%), Query Frame = 0
Query:    1 MGRPDSTSDSAGRPASTAPPSXXXXXXXXXXXXXXXXXVFAGVREQEPSSTMSPXXXXXXXXXXAGSIPSPAAPVAEARTASHRIVKLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMERQKLTYPLAKVFMNCGDDELSSAIASLNLWDAIPAGRQGRHSRHL 178
            MG PDSTSD AGRPASTAPPSXXXXXXXXXXXXXXXXX                XXXXXXXXXXAGSIPSPAAPVAE RTASHRI+KLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIM RQKLTYPLAKVFMNCGDDELSSAIASLNLWDAIPAGRQGRHSRHL
Sbjct:    1 MGYPDSTSDGAGRPASTAPPSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAGSIPSPAAPVAEVRTASHRIMKLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMGRQKLTYPLAKVFMNCGDDELSSAIASLNLWDAIPAGRQGRHSRHL 178          
BLAST of mRNA_Ecto-sp9_F_contig930.17462.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C951_9STRA)

HSP 1 Score: 82.8 bits (203), Expect = 5.130e-17
Identity = 40/92 (43.48%), Postives = 59/92 (64.13%), Query Frame = 0
Query:   79 RTASHRIVKLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMERQKLTYPLAKVFMNCGDDELSSAIASLNLWDAIPAGR 170
            R  +HR + +  +    P+L    +  LA+H + I D+  + +  A QLL EIM RQKLT+ LAKVFMNCG D++  A+ SLNL++A+P G+
Sbjct:   40 RKPTHRTITVQMKCAAVPSLTDMAISKLADHCESITDISCLPEMLAVQLLSEIMRRQKLTFALAKVFMNCGHDDICRAMESLNLFNAVPVGK 131          
BLAST of mRNA_Ecto-sp9_F_contig930.17462.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TNS6_9STRA)

HSP 1 Score: 67.4 bits (163), Expect = 1.080e-10
Identity = 30/80 (37.50%), Postives = 51/80 (63.75%), Query Frame = 0
Query:   91 RVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMERQKLTYPLAKVFMNCGDDELSSAIASLNLWDAIPAGR 170
            R +  P L + C+  +A++   +V + G+ ++   ++L EI+ R KL Y L +VF+  G +ELS A++SLNL+DA+  GR
Sbjct:   97 RAHTPPPLTHLCMATIADNCSGLVSVNGLAEELCIRILREILLRGKLDYRLCRVFIESGHEELSKAVSSLNLFDALGCGR 176          
BLAST of mRNA_Ecto-sp9_F_contig930.17462.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D6D4_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 6.870e-9
Identity = 33/86 (38.37%), Postives = 52/86 (60.47%), Query Frame = 0
Query:   83 HRIVKLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVGQDTARQLLEEIMERQKLTYPLAKVFMNCGDDE-LSSAIASLNLWDAIP 167
            H   K+A + Y+ P+L   C++ LA+++D IVDL  + + +   LL +IM RQKLT PLA+VF+   +   L   +  L+L+ A P
Sbjct:    7 HTTTKVAVK-YEVPSLSGLCIKFLADNSDSIVDLSNIDERSGVMLLMQIMRRQKLTVPLARVFIRSFEGTALGEGVKGLDLYAATP 91          
BLAST of mRNA_Ecto-sp9_F_contig930.17462.1 vs.
Match: Uncharacterized (protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XKY4_DIALT)

HSP 1 Score: 57.8 bits (138), Expect = 1.070e-7
Identity = 33/94 (35.11%), Postives = 48/94 (51.06%), Query Frame = 0
Query:   85 IVKLAPRVYQAPTLRYCCVQVLAEHADKIVDLRGVG-QDTARQLLEEIMERQKLTYPLAKVFMNCGDDELSSAIASLNLWDAIPAGRQGRHSRH 177
            +  L  R  + P L   C+  +A   + +VDLR V  Q     LL  I+   KL + LA+VF  CG +E+  A+ + +L DA+P     R SRH
Sbjct:   18 VAPLQRRDSRVPKLVDLCLDRMASRLESVVDLRPVKEQSLCMALLHRIISNGKLDFRLARVFQQCGHEEIEQALMTADLLDALPGPMDVRASRH 111          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig930.17462.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
Uncharacterized4.220e-7888.20protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.130e-1743.48protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized1.080e-1037.50protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]
Hypothetical6.870e-938.37protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]
Uncharacterized1.070e-735.11protein n=1 Tax=Diacronema lutheri TaxID=2081491 R... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig930contigEcto-sp9_F_contig930:14373..19022 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig930.17462.1mRNA_Ecto-sp9_F_contig930.17462.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig930 13734..19056 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig930.17462.1 ID=prot_Ecto-sp9_F_contig930.17462.1|Name=mRNA_Ecto-sp9_F_contig930.17462.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=179bp
MGRPDSTSDSAGRPASTAPPSPSSSAASSTAASSAAAPVFAGVREQEPSS
TMSPRRRRGVGGGGAGSIPSPAAPVAEARTASHRIVKLAPRVYQAPTLRY
CCVQVLAEHADKIVDLRGVGQDTARQLLEEIMERQKLTYPLAKVFMNCGD
DELSSAIASLNLWDAIPAGRQGRHSRHL*
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