prot_Ecto-sp9_F_contig929.17448.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig929.17448.1
Unique Nameprot_Ecto-sp9_F_contig929.17448.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length55
Homology
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BLAST of mRNA_Ecto-sp9_F_contig929.17448.1 vs.
Match: Nischarin/ (IRAS/ imidazoline receptor n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMA8_ECTSI)

HSP 1 Score: 108 bits (269), Expect = 4.400e-26
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 VVVDLKGERAFDPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQRRQSSSWWKL 54
            VVVDLKGERAFDPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQ+RQSSSWWKL
Sbjct: 1812 VVVDLKGERAFDPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQQRQSSSWWKL 1865
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BLAST of mRNA_Ecto-sp9_F_contig929.17448.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K372_9PHAE)

HSP 1 Score: 107 bits (268), Expect = 6.000e-26
Identity = 53/54 (98.15%), Postives = 54/54 (100.00%), Query Frame = 0 
Query:    1 VVVDLKGERAFDPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQRRQSSSWWKL 54
            VVVDLKGERAF+PRRQWRLQCRTRGSAEGVASAVLRLSRERVQQRRQSSSWWKL
Sbjct: 1833 VVVDLKGERAFNPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQRRQSSSWWKL 1886
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig929.17448.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Nischarin/4.400e-2698.15IRAS/ imidazoline receptor n=1 Tax=Ectocarpus sili... [more]
Uncharacterized6.000e-2698.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig929contigEcto-sp9_F_contig929:20228..20392 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig929.17448.1mRNA_Ecto-sp9_F_contig929.17448.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig929 20228..20392 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig929.17448.1 ID=prot_Ecto-sp9_F_contig929.17448.1|Name=mRNA_Ecto-sp9_F_contig929.17448.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=55bp
VVVDLKGERAFDPRRQWRLQCRTRGSAEGVASAVLRLSRERVQQRRQSSS
WWKL*
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