prot_Ecto-sp9_F_contig9286.17445.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9286.17445.1
Unique Nameprot_Ecto-sp9_F_contig9286.17445.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length200
Homology
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidylprolyl (isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KLT5_9PHAE)

HSP 1 Score: 366 bits (940), Expect = 2.010e-126
Identity = 193/200 (96.50%), Postives = 196/200 (98.00%), Query Frame = 0
Query:    1 MMAPMRVLACLSLCLVVVDGYNARVPTMSGGNGGTQPRGRFIAKAACAAASLTGLVVTAPFIVGSDSADGVAAVAAETARNVAVAPALAEEELGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            MMAPMRVLA LSLCLV+VDGYNA+VPTMSGGNGGTQPRGRFIAKAACAAASLTGL V APFIVGSDSADGVAAVAAETARNVAVAPALAEE LGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQ+
Sbjct:    1 MMAPMRVLAGLSLCLVIVDGYNAKVPTMSGGNGGTQPRGRFIAKAACAAASLTGLAVAAPFIVGSDSADGVAAVAAETARNVAVAPALAEEALGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQL 200          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YRY8_9STRA)

HSP 1 Score: 138 bits (348), Expect = 3.930e-37
Identity = 77/129 (59.69%), Postives = 94/129 (72.87%), Query Frame = 0
Query:   72 AAVAAETARNVAVAPALAEEELGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            AAV A     VA AP  A  E   K   V+F V+L+  + G+FV++V PDWAP GAARF  L  + FF D RFFRVLKGFVAQFGI+GDP V AK+R + ++DDPVTQSNKRGTVVFAT+G N+RT+Q+
Sbjct:   54 AAVGAAAGVGVAAAPKGAFAEGDPK---VQFQVELAPGKQGTFVMQVHPDWAPKGAARFLELVDSDFFTDVRFFRVLKGFVAQFGISGDPQVSAKWRASAIRDDPVTQSNKRGTVVFATAGANTRTSQL 179          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RJE7_9STRA)

HSP 1 Score: 138 bits (347), Expect = 1.530e-36
Identity = 72/116 (62.07%), Postives = 86/116 (74.14%), Query Frame = 0
Query:   85 APALAEEELGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            AP LAE+   + P  V F VQLS EE G   ++V PDW+P GA RF  L +AGF+ DCRFFRVL GFVAQFGINGDPAV +++RG  ++DDPVT +N RGT+ FAT G NSRTTQV
Sbjct:   97 APGLAED--AAAPFDVLFTVQLSPEEEGQVGLKVHPDWSPRGAQRFRELVEAGFYNDCRFFRVLPGFVAQFGINGDPAVMSQWRGRNLRDDPVTVTNSRGTLSFATGGPNSRTTQV 210          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XWI2_9STRA)

HSP 1 Score: 132 bits (332), Expect = 3.210e-35
Identity = 64/102 (62.75%), Postives = 80/102 (78.43%), Query Frame = 0
Query:   99 YVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            YVKFDVQLSD ++GSFV+EV P WAP GA RF  L    FF  CRFFRV+K FVAQFGI+G+P VQ+++R   ++DDPVTQ N +G++ FATSG +SRTTQ+
Sbjct:   30 YVKFDVQLSDHDTGSFVLEVNPSWAPNGAQRFKELLDDDFFAGCRFFRVIKDFVAQFGIHGNPGVQSQWRDQKIKDDPVTQKNYKGSLTFATSGPDSRTTQL 131          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CL93_9STRA)

HSP 1 Score: 131 bits (329), Expect = 4.740e-34
Identity = 69/129 (53.49%), Postives = 96/129 (74.42%), Query Frame = 0
Query:   72 AAVAAETARNVAVAPALAEEELGSKPSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            AA    T   +A +PALA++E G K  +   ++   +  SG+FV+++RP WAP+GA RF  L++AGF+ DCR FRV+ GF++QFGINGDP +QAKY+ + M+DDPV +SN RGTVVFAT+G N+RTTQ+
Sbjct:   71 AAAFTTTTSLLAPSPALADDE-GRKIEFTVQNLDGLEGLSGTFVIQMRPTWAPIGAQRFEELTEAGFWNDCRIFRVIPGFISQFGINGDPKMQAKYKVS-MRDDPVRESNSRGTVVFATAGPNTRTTQI 197          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYD7_9EUKA)

HSP 1 Score: 131 bits (330), Expect = 1.010e-33
Identity = 96/216 (44.44%), Postives = 124/216 (57.41%), Query Frame = 0
Query:    7 VLACLSLCLVVVDGYNARVPTMSGGNGGTQ-----PRGRF-----IAKAACAAASLTGLVVT-----------APFIVGSDSADGVAAVAAETARNVAVAPALAEEELGSKPSY-VKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            V+AC+ L      G++A    M+  NGG Q     P GR       AKA  +AA   G V T           +P +   D A GV   A      +A     A+ E GS   + V+F+VQL+ +++  FV+EV P+WAPLGA +F  L   GF+ DCRFFRV++GFV Q+GINGDP V  KY+  + QDDPV  SNKRGT+ FATSGKNSRTTQ+
Sbjct:   51 VVACVCL------GFSA----MAWKNGGVQGSMAKPAGRISTKISAAKAFASAAKAEGTVATRASKSDKLGGDSPVVSRRDVAVGVPVGA-----GLAAVAGKAKAEEGSGGVFNVEFEVQLTADKTDKFVIEVHPEWAPLGAEQFKKLVTDGFYNDCRFFRVVEGFVVQWGINGDPDVNKKYKKPI-QDDPVKTSNKRGTLTFATSGKNSRTTQL 250          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1C2E0_9STRA)

HSP 1 Score: 129 bits (325), Expect = 3.220e-33
Identity = 61/90 (67.78%), Postives = 76/90 (84.44%), Query Frame = 0
Query:  111 SGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            +G+FVV++RPDWAP+GAARFT L++ GF+ D RFFRV+ GF+AQFGIN DPAVQA +R   ++DDPV  SN RGT+VFATSG NSRTTQ+
Sbjct:  136 TGTFVVKLRPDWAPIGAARFTELTEQGFWNDIRFFRVIPGFIAQFGINADPAVQATWRNKSLRDDPVKVSNTRGTLVFATSGPNSRTTQL 225          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidylprolyl (isomerase n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TLE1_9EUKA)

HSP 1 Score: 130 bits (326), Expect = 3.240e-33
Identity = 62/101 (61.39%), Postives = 81/101 (80.20%), Query Frame = 0
Query:  100 VKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            V+F+VQL+ +++  FV+EV P+WAP GA +F  L   GF++DCRFFRV++GFV Q+GINGDP V  KY+ A+ QDDPV  SN+RGT+ FATSGKNSRTTQ+
Sbjct:  142 VEFEVQLTADKTDKFVIEVHPEWAPHGAEQFKKLVNDGFYDDCRFFRVVEGFVVQWGINGDPEVNKKYKKAI-QDDPVKTSNERGTLTFATSGKNSRTTQL 241          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YYN4_9EUKA)

HSP 1 Score: 125 bits (315), Expect = 4.840e-33
Identity = 61/97 (62.89%), Postives = 76/97 (78.35%), Query Frame = 0
Query:  104 VQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            VQL+ +++  FV+EV P+WAPLGA +F  L   GF+ DCRFFRV++GFV Q+GINGDP V  KY+  + QDDPV  SNKRGT+ FATSGKNSRTTQ+
Sbjct:   10 VQLTADKTDKFVIEVHPEWAPLGAEQFKKLVTDGFYNDCRFFRVVEGFVVQWGINGDPDVNKKYKKPI-QDDPVKTSNKRGTLTFATSGKNSRTTQL 105          
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Match: Peptidyl-prolyl (cis-trans isomerase n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3FBK8_9EUKA)

HSP 1 Score: 125 bits (314), Expect = 1.510e-32
Identity = 59/104 (56.73%), Postives = 79/104 (75.96%), Query Frame = 0
Query:   97 PSYVKFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKGFVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV 200
            P  V+FDV L  +++G F +EV PDWAPLGAARF  + +A FF+  RFFRV+ GF+AQFGI+  P + A+++G  + DDPV +SNKRG + FATSGK+SRTTQ+
Sbjct:   31 PFVVEFDVTLGSKDTGKFQLEVHPDWAPLGAARFKEMVEAEFFKGVRFFRVISGFMAQFGIHPKPTIAAEWKGKALTDDPVVESNKRGYISFATSGKDSRTTQM 134          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9286.17445.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Peptidylprolyl2.010e-12696.50isomerase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6... [more]
Peptidyl-prolyl3.930e-3759.69cis-trans isomerase n=1 Tax=Tribonema minus TaxID=... [more]
Peptidyl-prolyl1.530e-3662.07cis-trans isomerase n=1 Tax=Rhizochromulina marina... [more]
Hypothetical3.210e-3562.75protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Peptidylprolyl4.740e-3453.49isomerase n=1 Tax=Proboscia inermis TaxID=420281 R... [more]
Peptidylprolyl1.010e-3344.44isomerase n=1 Tax=Lotharella globosa TaxID=91324 R... [more]
Peptidyl-prolyl3.220e-3367.78cis-trans isomerase n=1 Tax=Corethron hystrix TaxI... [more]
Peptidylprolyl3.240e-3361.39isomerase n=1 Tax=Lotharella oceanica TaxID=641309... [more]
Peptidyl-prolyl4.840e-3362.89cis-trans isomerase n=1 Tax=Lotharella globosa Tax... [more]
Peptidyl-prolyl1.510e-3256.73cis-trans isomerase n=1 Tax=Haptolina ericina TaxI... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPFAMPF00160Pro_isomerasecoord: 106..199
e-value: 2.5E-10
score: 40.8
IPR002130Cyclophilin-type peptidyl-prolyl cis-trans isomerase domainPROSITEPS50072CSA_PPIASE_2coord: 101..200
score: 9.919
IPR029000Cyclophilin-like domain superfamilyGENE3D2.40.100.10coord: 103..200
e-value: 1.4E-14
score: 56.2
IPR029000Cyclophilin-like domain superfamilySUPERFAMILY50891Cyclophilin-likecoord: 98..199
NoneNo IPR availablePANTHERPTHR43246FAMILY NOT NAMEDcoord: 73..199
NoneNo IPR availablePANTHERPTHR43246:SF8coord: 73..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 19..22
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 23..200
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..22
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..6
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 7..18
NoneNo IPR availableSIGNALP_EUKSignalP-TMSignalP-TMcoord: 1..20
score: 0.826

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9286contigEcto-sp9_F_contig9286:2002..5332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9286.17445.1mRNA_Ecto-sp9_F_contig9286.17445.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9286 2002..5332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9286.17445.1 ID=prot_Ecto-sp9_F_contig9286.17445.1|Name=mRNA_Ecto-sp9_F_contig9286.17445.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=200bp
MMAPMRVLACLSLCLVVVDGYNARVPTMSGGNGGTQPRGRFIAKAACAAA
SLTGLVVTAPFIVGSDSADGVAAVAAETARNVAVAPALAEEELGSKPSYV
KFDVQLSDEESGSFVVEVRPDWAPLGAARFTLLSKAGFFEDCRFFRVLKG
FVAQFGINGDPAVQAKYRGAVMQDDPVTQSNKRGTVVFATSGKNSRTTQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002130Cyclophilin-type_PPIase_dom
IPR029000Cyclophilin-like_dom_sf