prot_Ecto-sp9_F_contig9264.17425.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9264.17425.1
Unique Nameprot_Ecto-sp9_F_contig9264.17425.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length199
Homology
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Beta_helix (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3G3_9PHAE)

HSP 1 Score: 328 bits (841), Expect = 3.140e-109
Identity = 159/197 (80.71%), Postives = 178/197 (90.36%), Query Frame = 0
Query:    1 MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGT-DRENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFR 196
            MSSSLLLPLL +GCSSFYGQCATISI+PGGTAFQDALD VNPGDVIEL +GDYWE LKT TDGTADMPITIRGA GT D+ENVVLRG GT +RVLEIKHDYYI+E FTV+G AE DP R++DSDSA+DMWRD+LIYA+A+R+PTER GGY+S +DGLVIRNM + NAGGECIRLRDHVT AEV+ N+ITDCGIYDFR
Sbjct:    1 MSSSLLLPLLFIGCSSFYGQCATISITPGGTAFQDALDVVNPGDVIELSNGDYWEDLKTRTDGTADMPITIRGAGGTGDKENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGHAEGDPDRDADSDSAQDMWRDVLIYAVANREPTERAGGYISAIDGLVIRNMAVTNAGGECIRLRDHVTNAEVYSNHITDCGIYDFR 197          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT7_9PHAE)

HSP 1 Score: 337 bits (864), Expect = 2.410e-108
Identity = 162/197 (82.23%), Postives = 180/197 (91.37%), Query Frame = 0
Query:    1 MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTD-RENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFR 196
            MSSSLLLPLL +GC SFYGQCATISI+PGGTAFQDALD VNPGDVIELG+GDYWE LKT TDGT DMPITIRGA GTD RENVVLRG GT +RVLEIKHDYYI+E FTV+GDAEDDP R++DSDS EDMWRD+LIYA+A+R+PTERDGGY+S +DGLVIRNM + NAGGECIRLRDHVTYAEV+ N+ITDCGI+DFR
Sbjct:    6 MSSSLLLPLLFIGCLSFYGQCATISITPGGTAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNHITDCGIFDFR 202          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L8H5_9PHAE)

HSP 1 Score: 329 bits (844), Expect = 1.760e-105
Identity = 159/197 (80.71%), Postives = 177/197 (89.85%), Query Frame = 0
Query:    1 MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTD-RENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFR 196
            MSSSLL+PLL + C SFYGQCATISI+PGGTAFQDALD VNPGDVIELG+GDYWE LKT TDGT DMPITIRGA GTD RENVVLRG GT +RVLEIKHDYYI+E FTV+GDAEDDP R++DSDS EDMWRD+LIYA+A+R+PTERDGGY+S +DGLVIRNM + NAGGECIRLRDHVTYAEV+ N I DCGIYD+R
Sbjct:    7 MSSSLLVPLLFICCLSFYGQCATISITPGGTAFQDALDVVNPGDVIELGNGDYWEDLKTRTDGTVDMPITIRGAGGTDDRENVVLRGAGTSTRVLEIKHDYYIVEDFTVNGDAEDDPDRDADSDSPEDMWRDVLIYAVANREPTERDGGYVSAIDGLVIRNMAVTNAGGECIRLRDHVTYAEVYSNYIIDCGIYDYR 203          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Putative (nosD copper-binding protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIS4_ECTSI)

HSP 1 Score: 271 bits (694), Expect = 3.700e-86
Identity = 134/143 (93.71%), Postives = 137/143 (95.80%), Query Frame = 0
Query:   34 QDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTD-RENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRD 175
            +DALDEVNPGDVIELGHGDYWE LKT TDGTADMPITIRGAAGTD RENVVLRGDGT SRVLEIKHDYYIIE FTVDGDAEDDP RNSDSDSAEDMWRDILIYAIADR+PTERDGGY+STLDGLVIRNMKLANAGGECIRLRD
Sbjct:   17 KDALDEVNPGDVIELGHGDYWEDLKTRTDGTADMPITIRGAAGTDDRENVVLRGDGTSSRVLEIKHDYYIIEDFTVDGDAEDDPNRNSDSDSAEDMWRDILIYAIADREPTERDGGYVSTLDGLVIRNMKLANAGGECIRLRD 159          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: EsV-1-164 (n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN05_ECTSI)

HSP 1 Score: 224 bits (572), Expect = 2.170e-72
Identity = 111/141 (78.72%), Postives = 121/141 (85.82%), Query Frame = 0
Query:    3 SSLLLPLLLLGCSSFYGQCATISISPGGTAFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTD-RENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKP 142
            S LLLPLL LG S+F GQCATISISPGGTAFQDALDEVNPGDVIE+GHGDYWE +KT  DGTADMPITIRGA GTD R+NVVLRGDGT SRV E+KHDYYIIE FTV+GDAEDDP R + SDS +++WRDILIYA   R P
Sbjct:    2 SPLLLPLLFLGFSTFCGQCATISISPGGTAFQDALDEVNPGDVIEIGHGDYWEDIKTTIDGTADMPITIRGAGGTDDRDNVVLRGDGTSSRVFEVKHDYYIIEDFTVNGDAEDDPDRGTGSDSIKELWRDILIYATGRRFP 142          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: EsV-1-164 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FN06_ECTSI)

HSP 1 Score: 177 bits (448), Expect = 5.090e-54
Identity = 86/106 (81.13%), Postives = 92/106 (86.79%), Query Frame = 0
Query:   32 AFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTD-RENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYA 136
            A  DALDEVNPGDVIELGHGDYWE LKT  DGTADMPITIRGA GTD R+NVVLRGDGT SRV E+KHDYYIIE FTV+GDAEDDP R S SDS +++WRDILIYA
Sbjct:    2 ANNDALDEVNPGDVIELGHGDYWEDLKTTIDGTADMPITIRGAGGTDDRDNVVLRGDGTSSRVFEVKHDYYIIEDFTVNGDAEDDPDRGSGSDSIKELWRDILIYA 107          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Beta_helix (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK02_9PHAE)

HSP 1 Score: 122 bits (306), Expect = 9.860e-29
Identity = 67/184 (36.41%), Postives = 103/184 (55.98%), Query Frame = 0
Query:   19 GQCATISISPGGTAFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTDRENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKP----TERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFRFE 198
            G   T+++  G  + Q ALD  +PG  I +  G Y EALK+  DGT + PIT++G +       +++G       +EI HDYY++  FT+DG  ++D  +    D+  + +R   +    +R+P     E+   Y S +DG+VI+NMK+ N GGE IR+R  VT   + HN IT  G YDF+F+
Sbjct:  358 GSGGTVTVKEG-ESIQAALDAASPGTTILIEAGTYHEALKSRVDGTKEQPITLQGPSSGP--TAIIKGSDKSGTCVEINHDYYVLNDFTIDGLIKEDCNK----DNVRECFRAKCLAVRGNRQPRDHTNEKGVAYKSAVDGVVIKNMKIYNCGGEGIRIRYFVTNCVLFHNRITSTGCYDFKFD 534          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: EsV-1-164 (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRT2_ECTSI)

HSP 1 Score: 120 bits (300), Expect = 6.190e-28
Identity = 70/163 (42.94%), Postives = 97/163 (59.51%), Query Frame = 0
Query:   34 QDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTDRENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFR 196
            Q  LD+ +PGD I +  G +  +L T  DGT D PITIR   GT  E+ VLRGD  ++RVLE+ H++YII+GFT+DGD           D + D +++ L+Y    R P+E DG   S++ G+ ++ M L NAG EC+R+R   T   V  N I  CGI DF+
Sbjct:   62 QALLDDASPGDTIYIPAGTHDVSLTTVVDGTEDEPITIRNELGTSAEDCVLRGDD-RARVLEVLHNHYIIQGFTIDGD-----------DGSGD-YKEQLLYIEGSRDPSEVDG-VDSSITGVNVQGMVLKNAGKECLRIRYFATNCVVQVNEIGPCGIQDFQ 210          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Uncharacterized (protein n=4 Tax=Rhizobium TaxID=379 RepID=J3BM99_9HYPH)

HSP 1 Score: 113 bits (283), Expect = 1.130e-26
Identity = 76/187 (40.64%), Postives = 97/187 (51.87%), Query Frame = 0
Query:   14 CSSFYGQ--CATISISPGGT-AFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTDRENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFRF 197
            C++F       TI +SP  T   Q AL+   PGDVI L  G Y+E  KT  +G    PI I G       + V+RG G  SRV+EI HDY  + GFTVDG           + + +  +RD LIY I     T  DG     + GL I NM + NAGGECIRLR      E+ ++ I++CG YDF F
Sbjct:   20 CAAFASASFATTIDVSPSPTHGIQAALNRAQPGDVIRLRPGVYYEDFKTVRNGRPGKPIVITGP-----RSAVIRGSGA-SRVIEINHDYTELRGFTVDG--------KFGAGNTKGSYRDKLIYVIG---KTRGDG-----VTGLRILNMSVKNAGGECIRLRYQTRRNEIAYSQISNCGRYDFAF 184          
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Match: Nitrous (oxide reductase family maturation protein NosD n=8 Tax=Rhizobium TaxID=379 RepID=A0A1H8ILZ4_9HYPH)

HSP 1 Score: 112 bits (280), Expect = 3.080e-26
Identity = 74/187 (39.57%), Postives = 98/187 (52.41%), Query Frame = 0
Query:   14 CSSFYGQ--CATISISPGGT-AFQDALDEVNPGDVIELGHGDYWEALKTWTDGTADMPITIRGAAGTDRENVVLRGDGTKSRVLEIKHDYYIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYLSTLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFRF 197
            C++F G    ATI +SP    + Q AL++  PGDVI L  G Y+E  KT  +G    PI I G       + +++G G   RV+EI HDY ++ GFTVDG       + S        +RD LIY I   +    DG     + GL I NM + NAGGECIRLR      E+ ++ I +CG YDF F
Sbjct:   20 CAAFAGASFAATIDVSPSPRHSIQAALNKAEPGDVIRLKPGVYYEDFKTVRNGKPGKPIVITGP-----RSAIVKGSGAP-RVIEINHDYTVLRGFTVDGKVGAGNNKRS--------YRDKLIYVIGKARG---DG-----VTGLRILNMSVKNAGGECIRLRYQTRRNEIAYSQINNCGRYDFAF 184          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9264.17425.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Beta_helix3.140e-10980.71domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Uncharacterized2.410e-10882.23protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.760e-10580.71protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Putative3.700e-8693.71nosD copper-binding protein n=1 Tax=Ectocarpus sil... [more]
EsV-1-1642.170e-7278.72n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
EsV-1-1645.090e-5481.13n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Beta_helix9.860e-2936.41domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
EsV-1-1646.190e-2842.94n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7... [more]
Uncharacterized1.130e-2640.64protein n=4 Tax=Rhizobium TaxID=379 RepID=J3BM99_9... [more]
Nitrous3.080e-2639.57oxide reductase family maturation protein NosD n=8... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR012334Pectin lyase foldGENE3D2.160.20.10coord: 30..197
e-value: 2.1E-21
score: 78.4
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 4..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..199
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..3
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.756
IPR011050Pectin lyase fold/virulence factorSUPERFAMILY51126Pectin lyase-likecoord: 30..191

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9264contigEcto-sp9_F_contig9264:3..4263 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9264.17425.1mRNA_Ecto-sp9_F_contig9264.17425.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9264 3..4263 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9264.17425.1 ID=prot_Ecto-sp9_F_contig9264.17425.1|Name=mRNA_Ecto-sp9_F_contig9264.17425.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=199bp
MSSSLLLPLLLLGCSSFYGQCATISISPGGTAFQDALDEVNPGDVIELGH
GDYWEALKTWTDGTADMPITIRGAAGTDRENVVLRGDGTKSRVLEIKHDY
YIIEGFTVDGDAEDDPKRNSDSDSAEDMWRDILIYAIADRKPTERDGGYL
STLDGLVIRNMKLANAGGECIRLRDHVTYAEVHHNNITDCGIYDFRFEC
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR012334Pectin_lyas_fold
IPR011050Pectin_lyase_fold/virulence