prot_Ecto-sp9_F_contig9218.17393.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9218.17393.1
Unique Nameprot_Ecto-sp9_F_contig9218.17393.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length139
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9218.17393.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJC8_ECTSI)

HSP 1 Score: 130 bits (327), Expect = 2.050e-32
Identity = 91/135 (67.41%), Postives = 91/135 (67.41%), Query Frame = 0 
Query:    1 MNSEWASARGSPVDPDLPTQSA----------------------TQXXXXXXXXXXXGDLNPPTARQPEVAPEEAVXXXXXXXXXXXXXXXXXXAAPKSTGLGLLGGVLWETVLDGVAWANRRISASEDASPSNG 113
            MNSEWASARGSPVDPDL  QSA                      TQ           GD NPPTARQPEVAPEEAVXXXXXXXXXXX       AAPKST LGLLGGVLWETVLDGVAWANRRISASEDASPSNG
Sbjct: 1636 MNSEWASARGSPVDPDLLIQSANPTPAPVGGEQSSGRGGTAVAATQQGSRAGSGAGSGDRNPPTARQPEVAPEEAVXXXXXXXXXXXAG-----AAPKSTSLGLLGGVLWETVLDGVAWANRRISASEDASPSNG 1765
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BLAST of mRNA_Ecto-sp9_F_contig9218.17393.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGI3_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 5.300e-25
Identity = 84/140 (60.00%), Postives = 88/140 (62.86%), Query Frame = 0 
Query:    1 MNSEWASARGSPVDPDLPTQSATQXXXXXXXXXXXG---------------------------DLNPPTARQPEVAPEEAVXXXXXXXXXXXXXXXXXXAAPKSTGLGLLGGVLWETVLDGVAWANRRISASEDASPSNG 113
            MNSEWAS RGSPVDP+L TQSA +                                       D NPPTARQPEVAPE   XXXXXXXXXXXXXX    AA KSTGLGLLGGVLWETVLDGVAWAN+RISASEDASP +G
Sbjct: 2182 MNSEWASTRGSPVDPNLLTQSANRTPAPVGGEQSSSSRGGXXXXXAQQGSRAGSXXXXXXXXXDRNPPTARQPEVAPEXXXXXXXXXXXXXXXXXE---AALKSTGLGLLGGVLWETVLDGVAWANKRISASEDASPDSG 2318
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9218.17393.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized2.050e-3267.41protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized5.300e-2560.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9218contigEcto-sp9_F_contig9218:1284..3122 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9218.17393.1mRNA_Ecto-sp9_F_contig9218.17393.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9218 1283..3122 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9218.17393.1 ID=prot_Ecto-sp9_F_contig9218.17393.1|Name=mRNA_Ecto-sp9_F_contig9218.17393.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=139bp
MNSEWASARGSPVDPDLPTQSATQQGSRAGSGAGSGDLNPPTARQPEVAP
EEAVVEETVAAAAAAAAAATGGAAPKSTGLGLLGGVLWETVLDGVAWANR
RISASEDASPSNGGTPPPDSNNTAGSSGGGGGGGREANG
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