prot_Ecto-sp9_F_contig9213.17389.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9213.17389.1
Unique Nameprot_Ecto-sp9_F_contig9213.17389.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length225
Homology
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQ48_9PHAE)

HSP 1 Score: 394 bits (1012), Expect = 5.460e-125
Identity = 200/222 (90.09%), Postives = 206/222 (92.79%), Query Frame = 0
Query:    3 DPNARKPSQQSHRIKSRRALRHNAGPLWAAKTMKNRAKRVALAYTTSRVCMLLLSLATLSSCLFYILATYLHDRHWVGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWHDAFYFTIVTLSTVG 224
            DPNARKPSQQSHRI SRRAL HNAGP WAAK+M +R KR  L YTTSRVCMLLLSLATLSSCLFYILATY+HDR WVGH+ET +GILFLVDYSLT  AAPVPLAYALGKGGLIDLVSCLPAFGSFQ WMASLSFVRYLRVGKAIRVMRNHKLL+SIF NDDVTIKATLLIVKVIGVVMMTSAILYGVERG TD EGTGAFNEPGWQWHDAFYFTIVTLSTVG
Sbjct:   13 DPNARKPSQQSHRITSRRALMHNAGPKWAAKSMTSRVKRAGLVYTTSRVCMLLLSLATLSSCLFYILATYVHDRPWVGHIETSFGILFLVDYSLTAAAAPVPLAYALGKGGLIDLVSCLPAFGSFQPWMASLSFVRYLRVGKAIRVMRNHKLLASIFPNDDVTIKATLLIVKVIGVVMMTSAILYGVERGPTDAEGTGAFNEPGWQWHDAFYFTIVTLSTVG 234          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEK1_ECTSI)

HSP 1 Score: 330 bits (847), Expect = 9.850e-111
Identity = 166/172 (96.51%), Postives = 168/172 (97.67%), Query Frame = 0
Query:   53 MLLLSLATLSSCLFYILATYLHDRHWVGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWHDAFYFTIVTLSTVG 224
            ML LSLATLSSCLFYILATYLHDRHWV HVETGYGILFLVDYSLTVVAAP+PLAYALGKGGLIDLVSCLPAFGSFQ WMASLSFVRYLRVGKAIRVMRNHKLL+SIF NDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWHDAFYFTIVTLSTVG
Sbjct:    1 MLFLSLATLSSCLFYILATYLHDRHWVRHVETGYGILFLVDYSLTVVAAPIPLAYALGKGGLIDLVSCLPAFGSFQPWMASLSFVRYLRVGKAIRVMRNHKLLASIFPNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWHDAFYFTIVTLSTVG 172          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB0_ECTSI)

HSP 1 Score: 162 bits (411), Expect = 2.500e-45
Identity = 87/182 (47.80%), Postives = 118/182 (64.84%), Query Frame = 0
Query:   52 CMLLLSLATLSSCLFYILATYLHDRHW--VGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPG-------WQWHDAFYFTIVTLSTVG 224
            CML  S+ TL SC+FYI+ TY  ++H   V   E  + ++F +DY L+V A  V L Y L   G++DL S  P FG+F  W+ SLSFVRYLR+GK  RV+RNH++L  I +  DVT+ A LL +K++G+++MT+AI+YG E+   D     AF++ G        QWHD  YFTIVTLSTVG
Sbjct:    4 CMLFTSITTLVSCVFYIVGTYTANQHHSIVIAGEAVFALVFFMDYVLSVTAEAVWLTYVLSFEGIVDLCSIFPVFGAFYRWLYSLSFVRYLRLGKVTRVIRNHRMLEKIGTFTDVTVNACLLGLKILGLILMTTAIIYGTEQAFKDETDGKAFDDSGTIEDSGTMQWHDCLYFTIVTLSTVG 185          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4I5_9PHAE)

HSP 1 Score: 168 bits (425), Expect = 3.090e-44
Identity = 95/205 (46.34%), Postives = 125/205 (60.98%), Query Frame = 0
Query:   31 AAKTMKNRAKRVALAYTTSRVCMLLLSLATLSSCLFYILATYLHDRHWVGHV----ETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGW-------QWHDAFYFTIVTLSTVG 224
            A K  KN+A   AL Y  SR CML  S+ TL SC+F+I+ TY    H   ++    E  + ++F VDY L+V A  V L Y L   G++DL S  P FG+F  W+ SLSFVRYLR+GK  RV+RNH+ L  I +  DVT+ A LL +K++G+++MT+AI+YG E+     E   AF            QWHD+ YFTIVTLSTVG
Sbjct:   24 AVKVTKNKAWTTALQYKKSRSCMLFTSITTLVSCVFFIVGTY--TAHQYDYIVIAGEAVFALVFFVDYVLSVTAEAVRLTYVLSFEGIVDLCSIFPVFGAFYSWLYSLSFVRYLRLGKVTRVIRNHRTLEKIGTFTDVTVNACLLGLKILGLILMTTAIIYGTEQAFKGDEDGKAFXXXXXXXXXXXMQWHDSLYFTIVTLSTVG 226          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Ion_trans (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM81_9STRA)

HSP 1 Score: 94.0 bits (232), Expect = 3.640e-19
Identity = 63/204 (30.88%), Postives = 101/204 (49.51%), Query Frame = 0
Query:   60 TLSSCLFYILATY-----------LHDRHWVGHVETGYG-------------ILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSIFSND--DVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGW-------------QWHDAFYFTIVTLSTVG 224
            T+ SC+ Y++ TY           ++     GHV+  Y              I F+VD++L++V AP  L Y     GL+D++S +P     +  +  LSF R+LR+ KA  ++R H+L   + + +  D++    LL VK+ G++ + ++I+Y +           A N  G+             +WHDAFYFTIVTLSTVG
Sbjct:   54 TVLSCILYVIFTYFRTSTSTEYSDVNGNPLPGHVDDPYHMDNIATWIQESITITFVVDFALSLVIAPSALRYVFSWPGLVDILSIIPILEPLKQGIYVLSFTRFLRLTKAFTILRQHRLRKGVLAGEAADLSFNVFLLGVKLAGLIFIATSIVYALAE---------APNIKGFSYMVDDTVVHQIVEWHDAFYFTIVTLSTVG 248          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: calcium-activated (potassium channel subunit alpha-1-like isoform X1 n=8 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C7BD5)

HSP 1 Score: 74.7 bits (182), Expect = 7.580e-12
Identity = 53/171 (30.99%), Postives = 88/171 (51.46%), Query Frame = 0
Query:   58 LATLSSCLFYILATY-LHDRHWVGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGT---GAFNEPGWQWHDAFYFTIVTLSTVG 224
            +A + S + Y+ +TY L   HW+  V   +G+ F+ DY L + +APV L Y +   GLIDL S L     +  +    +  + L V +A+R++ +  L S +     +  +  LL++  +G V + + IL  VE   T  +     G      + ++DAFYF IVT++TVG
Sbjct:  220 IAAVVSVVAYVRSTYILSSTHWIVIVRRVFGLFFVADYLLKLYSAPVRLYYVISVSGLIDLSSTLSIVCLWSKFKNDGAIPQMLLVLRALRILPS--LTSFVIVGGTIGQQIFLLVMYTLGAVFIAAGILQWVEYKTTSADKKIQQGCGVSGCFTFYDAFYFVIVTITTVG 388          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Uncharacterized (protein n=1 Tax=Marchantia polymorpha subsp. ruderalis TaxID=1480154 RepID=A0A176WRD8_MARPO)

HSP 1 Score: 69.7 bits (169), Expect = 3.860e-10
Identity = 60/173 (34.68%), Postives = 93/173 (53.76%), Query Frame = 0
Query:   58 LATLSSCLFYILATYLHDRH-WVGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLP-AFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSI-FSNDDVTIKATLLIVKVIGVVMMTSAILYGVE-RGLTDG--EGTGAFNEPGWQWHDAFYFTIVTLSTVG 224
            +A L+S + Y+ +TY ++   +V  VET  G+ FL+DY + + +APV L Y +   GL+DL+S LP AF     W    +F   + +   +RV+R   +L+SI  S   +T +   L+V   GV+ + + +L  VE R  T    E      +    +  AFYF IVT+STVG
Sbjct:  185 IAALTSVIVYVRSTYNYETPPYVIIVETVCGVFFLIDYVINLFSAPVRLYYIISATGLVDLLSVLPIAF----LWSKKKNFG--VEILLFLRVLRIMPVLTSIGLSGATITQQIFRLVVYAFGVIFIAAGLLQWVEYRASTTQYREDNNCSPKGCLTFFGAFYFMIVTISTVG 351          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Uncharacterized (protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6XTC0_MARPO)

HSP 1 Score: 66.6 bits (161), Expect = 4.340e-9
Identity = 50/168 (29.76%), Postives = 80/168 (47.62%), Query Frame = 0
Query:   61 LSSCLFYILATYLHD--RHWVGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMRNHKLLSSI-FSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGW-QWHDAFYFTIVTLSTVG 224
            L S + Y+ +TY  +   +WV   +    + FL DY + V   PV L Y +   G+ID +S +P    F+ +    S +R L+    +R++R   L   +      V  +  LL +   GV+ + + IL+ VE  +          E G   + +AFYF IVT+STVG
Sbjct:  181 LMSGVLYVYSTYRREAQNNWVSQTQNVISVAFLADYIMRVYCEPVRLYYLVSFWGVIDFLSVVPVILVFRSFPTVDSVIRLLQF---VRILRLFALSYRVGLFGSSVMQQIILLTIATFGVIFLDAGILHWVEYDVAPSVRKDTCPEQGCITFWEAFYFLIVTVSTVG 345          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: Ion_trans (domain-containing protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S0Q5_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 3.760e-8
Identity = 48/156 (30.77%), Postives = 76/156 (48.72%), Query Frame = 0
Query:   72 YLHDRHWVGHVETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSF--QHWMASLSFV-RYLRVGKAIRVMRNHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWHDAFYFTIVTLSTVG 224
            Y H R  V  + T +   F+ D+ L +  AP P  Y     G+IDLV+ +P+   F   +  +SL FV R LR+ +A+RV+R    +   F       +  + I+ VI V++  + +   +E    D            Q+HDA YF +VT+ST+G
Sbjct:   73 YSHSRAAVEAIATSF---FIFDFGLHLFVAPDPGKYVFSAHGIIDLVTIIPSLIVFVDPNSRSSLMFVFRVLRICRALRVLRLAHYVQ--FKKHGFEYELGVFILSVIAVILCAAGVYQALEVEQYD-------EHQKLQFHDALYFVLVTVSTIG 216          
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Match: ion (transporter n=2 Tax=unclassified Anabaena TaxID=2619674 RepID=UPI001444F45A)

HSP 1 Score: 62.0 bits (149), Expect = 6.370e-8
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 0
Query:   82 VETGYGILFLVDYSLTVVAAPVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMR--NHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTGAFNEPGWQWHDAFYFTIVTLSTVG 224
            ++T   I+F V+Y L + +A  P+ Y      +IDL++ LP   SF  W+  +S++R LR  + +R++R  + K L    SN+D  I A +L   +  +V + S ++Y VE           FN     + DAFYF++VT++TVG
Sbjct:   56 LDTCILIIFAVEYLLRLWSAEDPVKYIFSFYAVIDLIAILP---SFIGWV-DISYIRLLRWFRILRLLRFIDRKFLIGSISNEDSLIFARILFT-LFAIVFIFSGLIYQVEHPANPQN----FNT----FLDAFYFSVVTMTTVG 187          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9213.17389.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized5.460e-12590.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Ion_trans9.850e-11196.51domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Ion_trans2.500e-4547.80domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Ion_trans3.090e-4446.34domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Ion_trans3.640e-1930.88domain-containing protein n=1 Tax=Tribonema minus ... [more]
calcium-activated7.580e-1230.99potassium channel subunit alpha-1-like isoform X1 ... [more]
Uncharacterized3.860e-1034.68protein n=1 Tax=Marchantia polymorpha subsp. ruder... [more]
Uncharacterized4.340e-929.76protein n=2 Tax=Marchantia polymorpha TaxID=3197 R... [more]
Ion_trans3.760e-830.77domain-containing protein n=3 Tax=Phytophthora ker... [more]
ion6.370e-833.10transporter n=2 Tax=unclassified Anabaena TaxID=26... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027359Voltage-dependent channel domain superfamilyGENE3D1.20.120.350coord: 47..165
e-value: 3.5E-12
score: 48.2
NoneNo IPR availableGENE3D1.10.287.70coord: 166..224
e-value: 8.3E-7
score: 30.7
NoneNo IPR availablePANTHERPTHR10027:SF10SLOWPOKE POTASSIUM CHANNEL FAMILYcoord: 14..224
NoneNo IPR availablePANTHERPTHR10027CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAINcoord: 14..224
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 69..87
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 43..68
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..42
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..132
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 88..107
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 168..189
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 190..224
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 108..113
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 133..167
NoneNo IPR availableSUPERFAMILY81324Voltage-gated potassium channelscoord: 45..224
NoneNo IPR availableTMHMMTMhelixcoord: 51..73
NoneNo IPR availableTMHMMTMhelixcoord: 170..189
NoneNo IPR availableTMHMMTMhelixcoord: 88..110
IPR005821Ion transport domainPFAMPF00520Ion_transcoord: 50..185
e-value: 6.1E-8
score: 32.2

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9213contigEcto-sp9_F_contig9213:1809..5344 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9213.17389.1mRNA_Ecto-sp9_F_contig9213.17389.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9213 1809..5344 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9213.17389.1 ID=prot_Ecto-sp9_F_contig9213.17389.1|Name=mRNA_Ecto-sp9_F_contig9213.17389.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=225bp
QQDPNARKPSQQSHRIKSRRALRHNAGPLWAAKTMKNRAKRVALAYTTSR
VCMLLLSLATLSSCLFYILATYLHDRHWVGHVETGYGILFLVDYSLTVVA
APVPLAYALGKGGLIDLVSCLPAFGSFQHWMASLSFVRYLRVGKAIRVMR
NHKLLSSIFSNDDVTIKATLLIVKVIGVVMMTSAILYGVERGLTDGEGTG
AFNEPGWQWHDAFYFTIVTLSTVG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027359Volt_channel_dom_sf
IPR005821Ion_trans_dom