prot_Ecto-sp9_F_contig9199.17376.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9199.17376.1
Unique Name	prot_Ecto-sp9_F_contig9199.17376.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	237

Homology

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9199.17376.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G786_ECTSI)

HSP 1 Score: 271 bits (692), Expect = 8.410e-88
Identity = 213/237 (89.87%), Postives = 214/237 (90.30%), Query Frame = 0

Query:    1 MAGARGDFHGTMRAFFDRNLRFWHRSWLEERXXXXXXXXXXXXXXXXXXVEGGDGMDVSDDGLGTGEENRGSDDEVEDESTGREAGXXXXXXXATEVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGXXXXGDDFSDMSREELSALWGVLKRLGWFSLLQDAFSGVMFSNVLAYVRRRCVGGGGGPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELK 237
            MAGARGDFHGTMRAFFDRNLRFWHRSWLEERXXXXXXXXXXXXXXXXXXVEGGDGMDVSDD LG GEENRGSD E E         XXXXXXX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGXXXXGDDFSDMSREELSALWGVL+RLGWFSLLQDAFSGVMFSNVLAYVRR   G GG PVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDS VAIGELK
Sbjct:    1 MAGARGDFHGTMRAFFDRNLRFWHRSWLEERXXXXXXXXXXXXXXXXXXVEGGDGMDVSDDDLGAGEENRGSDGEGEXXXXXXXX-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDVGXXXXGDDFSDMSREELSALWGVLRRLGWFSLLQDAFSGVMFSNVLAYVRRSGGGXGGVPVDGSSAAYGWKQRLGLAVHEAFCSARIAELFDIIADYPDSGVAIGELK 236

[Close]

BLAST of mRNA_Ecto-sp9_F_contig9199.17376.1 vs.
Match: Anaphase-promoting (complex subunit 2 n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TR82_9STRA)

HSP 1 Score: 54.3 bits (129), Expect = 7.090e-5
Identity = 40/113 (35.40%), Postives = 53/113 (46.90%), Query Frame = 0

Query:  151 GVLKRLGWFSLLQDAFSGVMFSNVLAYVRRRCVGGGGGPV---------------------DGSSAAYGWK-----QRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELK 237
            G +  LG+   L+D    V++  V   V RRC G  G PV                      G   A G K     QR+   ++E FC+ RIAE+F+II D+PDSA A+ ELK
Sbjct:  170 GAVHALGYARELEDHVIEVLYQAVEDTVERRCRGEYGTPVLDSLHQWKRRVVDAWVAAVIGCGVGNAAGGKVREVRQRVEFLLYERFCTVRIAEMFEIITDFPDSACAVEELK 282

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9199.17376.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9199.17376.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
Uncharacterized	8.410e-88	89.87	protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ...	[more]
Anaphase-promoting	7.090e-5	35.40	complex subunit 2 n=4 Tax=Phaeomonas parva TaxID=1...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 94..133
None	No IPR available	PANTHER	PTHR45957	FAMILY NOT NAMED	coord: 195..237

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9199	contig	Ecto-sp9_F_contig9199:2174..5216 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9199.17376.1	mRNA_Ecto-sp9_F_contig9199.17376.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9199 2174..5216 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9199.17376.1 ID=prot_Ecto-sp9_F_contig9199.17376.1|Name=mRNA_Ecto-sp9_F_contig9199.17376.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=237bp
MAGARGDFHGTMRAFFDRNLRFWHRSWLEERRRRRQRRRQRRRSSGGGGV
EGGDGMDVSDDGLGTGEENRGSDDEVEDESTGREAGGGGTDGAATEVADS
SDKVEEEEEEEEEEEEEEEEEEAEEESDVGEEDDGDDFSDMSREELSALW
GVLKRLGWFSLLQDAFSGVMFSNVLAYVRRRCVGGGGGPVDGSSAAYGWK
QRLGLAVHEAFCSARIAELFDIIADYPDSAVAIGELK