prot_Ecto-sp9_F_contig9189.17364.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9189.17364.1
Unique Nameprot_Ecto-sp9_F_contig9189.17364.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length207
Homology
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: CS (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLQ0_9PHAE)

HSP 1 Score: 312 bits (800), Expect = 3.400e-103
Identity = 162/166 (97.59%), Postives = 163/166 (98.19%), Query Frame = 0
Query:    1 PPPGAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGGTKLTAKPGPAGVGAVGGGGQQAAPGNTV 166
            PPPGAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQID+PGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGGTKLTAKPGPA VGA G GGQQAAPGNTV
Sbjct:  172 PPPGAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDDPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGGTKLTAKPGPAKVGAGGRGGQQAAPGNTV 337          
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: CS (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LBI6_ECTSI)

HSP 1 Score: 225 bits (573), Expect = 4.270e-70
Identity = 118/141 (83.69%), Postives = 123/141 (87.23%), Query Frame = 0
Query:    9 RPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGGTKLTAKPGPAG 149
            R K + D  NE         P V+RSDVKVEVTG+MLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVR+AIEA  +KSAAGGG KLTAKPGPAG
Sbjct:   87 RAKKKADSKNE---------PDVSRSDVKVEVTGSMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKGLETRRPAPKPADPEMVREAIEAFMSKSAAGGGPKLTAKPGPAG 218          
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: CS (domain-containing protein n=1 Tax=Malassezia globosa (strain ATCC MYA-4612 / CBS 7966) TaxID=425265 RepID=A8QA32_MALGO)

HSP 1 Score: 57.4 bits (137), Expect = 7.790e-7
Identity = 27/88 (30.68%), Postives = 47/88 (53.41%), Query Frame = 0
Query:   13 RWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWW 100
            RW+Q  + VE+ I + P V    ++V      + + +R + ++ G LFKP+ P+GCTW ID+      K +++ L K     ++  WW
Sbjct:   37 RWNQMLDHVEVSIPLPPDVRARQIQVVFKPAWISVKMREECIVEGALFKPIQPDGCTWTIDDA-----KVLSVHLEKL----NQNEWW 115          
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: NudC2 (protein (Fragment) n=2 Tax=Strigomonas galati TaxID=1003336 RepID=A0A4P2TYN6_9TRYP)

HSP 1 Score: 55.8 bits (133), Expect = 2.380e-6
Identity = 30/92 (32.61%), Postives = 51/92 (55.43%), Query Frame = 0
Query:   16 QSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQ-PVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKG 106
            Q+ +E+ I++ + P      + V +T T LK+ L+ + P++ GNL+KP+     TW I++      KE+TITL+K       E WW   ++G
Sbjct:   31 QTEKEINIVVPLTPGTTSKQLVVVITTTHLKVGLKGKDPILEGNLYKPIKASESTWTIEDK-----KELTITLVKTN--LKYEEWWPCVVEG 115          
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: Hypothetical (protein n=1 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D3D5_CYCTE)

HSP 1 Score: 56.6 bits (135), Expect = 3.170e-6
Identity = 27/80 (33.75%), Postives = 47/80 (58.75%), Query Frame = 0
Query:   14 WDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPA 93
            W Q+ EE+E+ +++   V   DVKV+     +K+  R++ + A  LF+ +DP+GC W ++    G  K++ IT+ K E A
Sbjct:  156 WTQTEEELEMTVKLPEGVGSKDVKVKFMPQSIKIQCRSEGLQALKLFERIDPDGCIWTLETAKDGG-KQLVITMEKVEQA 234          
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: Hypothetical (protein n=1 Tax=Erythrolobus australicus TaxID=1077150 RepID=A0A7S1TK81_9RHOD)

HSP 1 Score: 55.5 bits (132), Expect = 4.080e-6
Identity = 29/97 (29.90%), Postives = 52/97 (53.61%), Query Frame = 0
Query:   11 KLRWDQSNEEVEIIIRVDPK-VARSDVKVEVTGTMLKLSLRNQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWWRAPLKG 106
            K  W Q+ +EV ++  V P  V + +V+V+   + LK+ +  +   +G L+ PV PE C WQ+D+       + T+TL   +   + + WW+  +KG
Sbjct:   13 KYSWTQTLKEVSVVFSVSPGGVTKKNVQVDFGRSSLKVVINGEVYASGELYGPVSPEDCFWQLDS------ADGTVTLFLEKT--THDEWWKCLVKG 101          
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Match: NudC2 (protein (Fragment) n=1 Tax=Trypanosoma sp. TCC1307 TaxID=2291724 RepID=A0A4P2TYM8_9TRYP)

HSP 1 Score: 52.0 bits (123), Expect = 6.840e-5
Identity = 28/86 (32.56%), Postives = 47/86 (54.65%), Query Frame = 0
Query:   16 QSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLRN-QPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWW 100
            QS+ EV I + +        V V++T   + +S++  QP+++G L+KPV  + CTW I++      K + +TL+K   A   E WW
Sbjct:   31 QSDAEVVITVSLPENTTSKMVSVDITAYRISISIKGKQPILSGELYKPVKSDECTWCIEDK-----KLLVVTLIKTNLA--YEEWW 109          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9189.17364.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
CS3.400e-10397.59domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
CS4.270e-7083.69domain-containing protein n=1 Tax=Ectocarpus silic... [more]
CS7.790e-730.68domain-containing protein n=1 Tax=Malassezia globo... [more]
NudC22.380e-632.61protein (Fragment) n=2 Tax=Strigomonas galati TaxI... [more]
Hypothetical3.170e-633.75protein n=1 Tax=Cyclophora tenuis TaxID=216820 Rep... [more]
Hypothetical4.080e-629.90protein n=1 Tax=Erythrolobus australicus TaxID=107... [more]
NudC26.840e-532.56protein (Fragment) n=1 Tax=Trypanosoma sp. TCC1307... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008978HSP20-like chaperoneGENE3D2.60.40.790coord: 4..111
e-value: 2.1E-19
score: 71.7
IPR008978HSP20-like chaperoneSUPERFAMILY49764HSP20-like chaperonescoord: 10..106
IPR007052CS domainPFAMPF04969CScoord: 10..89
e-value: 8.9E-14
score: 52.3
IPR007052CS domainPROSITEPS51203CScoord: 7..104
score: 16.157
IPR037898NudC familyPANTHERPTHR12356NUCLEAR MOVEMENT PROTEIN NUDCcoord: 9..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9189contigEcto-sp9_F_contig9189:314..4253 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9189.17364.1mRNA_Ecto-sp9_F_contig9189.17364.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9189 314..4254 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9189.17364.1 ID=prot_Ecto-sp9_F_contig9189.17364.1|Name=mRNA_Ecto-sp9_F_contig9189.17364.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=207bp
PPPGAVDNRPKLRWDQSNEEVEIIIRVDPKVARSDVKVEVTGTMLKLSLR
NQPVIAGNLFKPVDPEGCTWQIDNPGPGQPKEVTITLLKAEPAKSREAWW
RAPLKGLETRRPAPKPADPEMVRKAIEAIKAKSAAGGGTKLTAKPGPAGV
GAVGGGGQQAAPGNTVTAAASNGNTPRSAAGTAGGSTPSAGVAAAGAGKS
PAGAGSG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008978HSP20-like_chaperone
IPR007052CS_dom
IPR037898NudC_fam