prot_Ecto-sp9_F_contig9184.17361.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9184.17361.1
Unique Nameprot_Ecto-sp9_F_contig9184.17361.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length38
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9184.17361.1 vs.
Match: Prefoldin (subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5B3_ECTSI)

HSP 1 Score: 61.6 bits (148), Expect = 1.900e-10
Identity = 32/33 (96.97%), Postives = 33/33 (100.00%), Query Frame = 0 
Query:    1 METNMDKAKQSMKDKVPEIERSLELVRHLQERQ 33
            ME+NMDKAKQSMKDKVPEIERSLELVRHLQERQ
Sbjct:   67 MESNMDKAKQSMKDKVPEIERSLELVRHLQERQ 99
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9184.17361.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Prefoldin1.900e-1096.97subunit 3 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G5... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9184contigEcto-sp9_F_contig9184:5304..5417 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9184.17361.1mRNA_Ecto-sp9_F_contig9184.17361.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9184 5283..5417 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9184.17361.1 ID=prot_Ecto-sp9_F_contig9184.17361.1|Name=mRNA_Ecto-sp9_F_contig9184.17361.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=38bp
METNMDKAKQSMKDKVPEIERSLELVRHLQERQVWHA*
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