prot_Ecto-sp9_F_contig9172.17357.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9172.17357.1
Unique Nameprot_Ecto-sp9_F_contig9172.17357.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length420
Homology
BLAST of mRNA_Ecto-sp9_F_contig9172.17357.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFY5_ECTSI)

HSP 1 Score: 662 bits (1708), Expect = 5.250e-236
Identity = 381/422 (90.28%), Postives = 385/422 (91.23%), Query Frame = 0
Query:    1 FRRRKSKVDPLGSSGSKGNAA----DGSSPADGNRPAASLHVPARRGLFRRRRSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPRATIAVCGXXXXXSSSAHSGVRARGSPEGGGLLSKSDLSRAGXXXXXXXXXXXXXXXXXXPPSSVYPAPQPLHRIRSSGDDGMGLSQDPNFFPPIPLSEDGCSE-PSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFGNGGHMRLKLCKTPKPPPESGRAVRSPSTPASPVQDGGAGREGEDATAAILYGDSCEMVAKKVRPHREGVIRAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSADGTVADTHTHYKIPWNQVKSTGDSVGCCCVVGC 417
            FRRRKSKVDPLGSSGSKGNAA    DGSSPADGNRPAASLHVPARRGLFRRRRSNGXXXXXXXXXXXXXXXXXXXXXXXXX         SRPRATIAVCG     S+SAHSGVRARGSPEGGGLLSKSDLSR G   XXXXXXXXXXXXX  PPSSVYPAPQPLHRIRSSGDDGMGLSQDPNFFPPIPLSEDGCSE PSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFGNGGHMRLKLCKTPKPPPES R VRS  TPASPVQDGGAGREGEDA AAILYGDSCEMVAKKVRPHREGV+RAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSADGTVADTHTHYKIPWNQVK     + CCC+V C
Sbjct:   68 FRRRKSKVDPLGSSGSKGNAAAAAADGSSPADGNRPAASLHVPARRGLFRRRRSNGXXXXXXXXXXXXXXXXXXXXXXXXXVGLSLSDTESRPRATIAVCGGGGISSTSAHSGVRARGSPEGGGLLSKSDLSRTGAGGXXXXXXXXXXXXXESPPSSVYPAPQPLHRIRSSGDDGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSDGRLHGRLGPSLFGNGGHMRLKLCKTPKPPPESSRPVRSSPTPASPVQDGGAGREGEDAAAAILYGDSCEMVAKKVRPHREGVVRAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSADGTVADTHTHYKIPWNQVKKYR-GLCCCCLVDC 488          
BLAST of mRNA_Ecto-sp9_F_contig9172.17357.1 vs.
Match: CRAL-TRIO (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K175_9PHAE)

HSP 1 Score: 563 bits (1450), Expect = 1.340e-190
Identity = 342/435 (78.62%), Postives = 346/435 (79.54%), Query Frame = 0
Query:   13 SSGSKGNAA--DGSSPADGNRPAASLHVPARRGLFRRRRSNGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSRPR--ATIAVCGXXXXXSSSAHSGVRARGSPEGGGLLSKSDLSRAGXXXXXXXXXXXXXXXXXXPPSSVYPAPQPLHRIRSSGDDGMGLSQDPNFFPPIPLSEDGCSE-PSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYS-----------------------------------------DGRLHGRLGPSLFGNGGHMRLKLCKTPKPPPESGRAVRSPSTPASPVQDGGAGREGEDATAAILYGDSCEMVAKKVRPHREGVIRAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSADGTVADTHTHYKIPWNQ 401
            SSGSKG AA  DGSSPADGNRPAASLHVP RRGLFRRRRSNG XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      ATI+VCG     SSSAHSGVRARGSPEG  LLSKSDLS  G                  PPSSVYPAPQPLHRIRSS  DGMGLSQDPNFFPPIPLSEDGCSE PSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYS                                         DGRLHGRLGPSLFGNGGHMRLKLC TPKPPPE+ R VRS STPAS VQDGGAGREGEDA AAI YGDSCEMVAKKVRPHREGV+RAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFS+DGTVADTHTHYKIPWNQ
Sbjct:   79 SSGSKGTAAAADGSSPADGNRPAASLHVPGRRGLFRRRRSNGHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXATISVCGGGGI-SSSAHSGVRARGSPEGSVLLSKSDLSSTGVGGGWVGALASGGGGRESPPSSVYPAPQPLHRIRSSAGDGMGLSQDPNFFPPIPLSEDGCSEKPSSRGEVRFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPYSIFHECCFKIVDPHSEKEDGDVLHFGEEISLVDDRGMVWNNKDGRLHGRLGPSLFGNGGHMRLKLCNTPKPPPETSRMVRSSSTPASTVQDGGAGREGEDA-AAIFYGDSCEMVAKKVRPHREGVVRAPVTHFRRRHQIQLGGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSSDGTVADTHTHYKIPWNQ 511          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9172.17357.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized5.250e-23690.28protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
CRAL-TRIO1.340e-19078.62domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9172contigEcto-sp9_F_contig9172:918..5400 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9172.17357.1mRNA_Ecto-sp9_F_contig9172.17357.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9172 918..5400 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9172.17357.1 ID=prot_Ecto-sp9_F_contig9172.17357.1|Name=mRNA_Ecto-sp9_F_contig9172.17357.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=420bp
FRRRKSKVDPLGSSGSKGNAADGSSPADGNRPAASLHVPARRGLFRRRRS
NGHHHNGDGAGGQPRPLSRASSGGGGGVGLSLSDTDSRPRATIAVCGGGG
ISSSSAHSGVRARGSPEGGGLLSKSDLSRAGGGGGGGGALASGGGGRESP
PSSVYPAPQPLHRIRSSGDDGMGLSQDPNFFPPIPLSEDGCSEPSSRGEV
RFGDFIRLWCYSNYADKAGYVGYLRRTSRKRNSVGKGELFVLPPVPASPY
SDGRLHGRLGPSLFGNGGHMRLKLCKTPKPPPESGRAVRSPSTPASPVQD
GGAGREGEDATAAILYGDSCEMVAKKVRPHREGVIRAPVTHFRRRHQIQL
GGYLRSDGKGYACAFTIHHAPPRVSMVSVYSFSADGTVADTHTHYKIPWN
QVKSTGDSVGCCCVVGCVG*
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