prot_Ecto-sp9_F_contig9155.17350.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9155.17350.1
Unique Nameprot_Ecto-sp9_F_contig9155.17350.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length112
Homology
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2C9_ECTSI)

HSP 1 Score: 83.6 bits (205), Expect = 1.910e-17
Identity = 51/119 (42.86%), Postives = 69/119 (57.98%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEVALPLGFTSCINDCRRVCAEKRS-QGQQVEDSAALAGAAHRSDEALSA---------EKLPPQAP 111
            R++ CT G+  ++ ITTL+VV AL  +S E++K+ QIR +ALA   +GTLCLTE+ LPLGF SC+  C    A   S + Q V  + A  G A      +S          E+LPPQAP
Sbjct:  106 RNVFCTAGIVISYAITTLVVVIALLRESVESNKSAQIRDVALAANSLGTLCLTEITLPLGFRSCMKACSTGTAMANSTKTQAVGQTTANPGTAAAGATIISTTTTIKIIPLEELPPQAP 224          
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY97_9PHAE)

HSP 1 Score: 62.4 bits (150), Expect = 4.710e-9
Identity = 39/102 (38.24%), Postives = 58/102 (56.86%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEVALPLGFTSCINDCR-RVCAEKRSQGQQVED-SAALAGAAHRSDEALS 102
            ++I CTI V  A+ +TT++V+ AL   S +++ A     I   V Q  TLCLTE+ALPLGF+SC   C   +C+   S  +   D   A+AG +  S  A++
Sbjct:  256 KNITCTIAVVTAYAVTTVVVIAALIRQSNDSNTASLFADITPLVNQFVTLCLTEIALPLGFSSCWKACSLELCSWSSSPNEGPSDLETAMAGGSSGSGTAVN 357          
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN45_ECTSI)

HSP 1 Score: 52.4 bits (124), Expect = 7.230e-6
Identity = 24/65 (36.92%), Postives = 40/65 (61.54%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEVALPLGFTSCI 67
            R++ CTIG+   + +TT++VV      +  + KA Q+  +        TLC+TE++LPLGF+SC+
Sbjct:  104 RNVACTIGITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCVTEMSLPLGFSSCV 168          
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA0_9PHAE)

HSP 1 Score: 52.8 bits (125), Expect = 1.040e-5
Identity = 27/55 (49.09%), Postives = 37/55 (67.27%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEV 57
            R+I+CTIG+A A+VITT++VV AL     + DKA  +  I  ++    TLCLTEV
Sbjct:  189 RNIVCTIGIACAYVITTVVVVLALLSSRPDTDKAAAVGDIVPSINICVTLCLTEV 243          
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN53_ECTSI)

HSP 1 Score: 50.8 bits (120), Expect = 1.250e-5
Identity = 29/68 (42.65%), Postives = 42/68 (61.76%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEVALPLGFT--SCIN 68
            R+I+CT+G+A A+VITT++VV A      + +KA  + HI  ++    TLCLTEV     F   SCI+
Sbjct:   46 RNIVCTVGIACAYVITTVVVVLAHVSTPSDTNKAAVLGHITPSINICVTLCLTEVGGGNEFVIFSCIS 113          
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPA3_9PHAE)

HSP 1 Score: 52.0 bits (123), Expect = 2.110e-5
Identity = 24/65 (36.92%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEVALPLGFTSCI 67
            R++ CTI +   + +TT++VV      +  + KA Q+  +        TLCLTE++LPLGF+SC+
Sbjct:  235 RNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTEISLPLGFSSCV 299          
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K249_9PHAE)

HSP 1 Score: 51.2 bits (121), Expect = 2.450e-5
Identity = 24/65 (36.92%), Postives = 39/65 (60.00%), Query Frame = 0
Query:    3 RSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVGTLCLTEVALPLGFTSCI 67
            R++ CTI +   + +TT++VV      +  + KA Q+  +        TLCLTE++LPLGF+SC+
Sbjct:  134 RNVACTIAITFTYAVTTVIVVLGFLTTAPGSIKAAQLADLLPTANIFVTLCLTELSLPLGFSSCV 198          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9155.17350.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
Uncharacterized1.910e-1742.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.710e-938.24protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized7.230e-636.92protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized1.040e-549.09protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.250e-542.65protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized2.110e-536.92protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.450e-536.92protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 4..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9155contigEcto-sp9_F_contig9155:1262..2449 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9155.17350.1mRNA_Ecto-sp9_F_contig9155.17350.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9155 1231..2449 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9155.17350.1 ID=prot_Ecto-sp9_F_contig9155.17350.1|Name=mRNA_Ecto-sp9_F_contig9155.17350.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=112bp
IGRSIICTIGVAAAHVITTLLVVFALQGDSYEADKAFQIRHIALAVRQVG
TLCLTEVALPLGFTSCINDCRRVCAEKRSQGQQVEDSAALAGAAHRSDEA
LSAEKLPPQAP*
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