prot_Ecto-sp9_F_contig9154.17349.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9154.17349.1
Unique Nameprot_Ecto-sp9_F_contig9154.17349.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length191
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9154.17349.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA9_ECTSI)

HSP 1 Score: 372 bits (954), Expect = 1.080e-129
Identity = 186/191 (97.38%), Postives = 188/191 (98.43%), Query Frame = 0 
Query:    1 MSVCAFLGQLFPRSARRNGGELRCMRRGLSLLDSRWKADVDRKRKATFASEDKGMVDAVLMGGFYLPSDSFAMVVEYLDHGTAVRSTPSSKSWWRTISGLPQASHIDTNLGKRLPWGKLVTQLKTIKASNPLRAVARVTLGCRTKLGSFHNLGKVVGGVGLTHLDLTRSSGAKKLDFAALAKALPNLRGLA 191
            MSVCAFLGQLFPRSARRNGGELRCMRRGLSLLDSRWKADVDRKRKATFASEDKGMVDAVLMGGFYLPSDSFAMVVEYLDHGTAVRSTPSSKSWWRTISGLP ASHIDTN+GKRLPWG+LVTQLKTIKASNPLRAVARVTLGCRTKLGSFHNLGKVVGGVGLTHLDLTRS GAKKLDFAALAKALP LRGLA
Sbjct:    1 MSVCAFLGQLFPRSARRNGGELRCMRRGLSLLDSRWKADVDRKRKATFASEDKGMVDAVLMGGFYLPSDSFAMVVEYLDHGTAVRSTPSSKSWWRTISGLPPASHIDTNIGKRLPWGELVTQLKTIKASNPLRAVARVTLGCRTKLGSFHNLGKVVGGVGLTHLDLTRSWGAKKLDFAALAKALPTLRGLA 191
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9154.17349.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.080e-12997.38protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..11
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..191
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 12..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9154contigEcto-sp9_F_contig9154:79..2077 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9154.17349.1mRNA_Ecto-sp9_F_contig9154.17349.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9154 79..2077 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9154.17349.1 ID=prot_Ecto-sp9_F_contig9154.17349.1|Name=mRNA_Ecto-sp9_F_contig9154.17349.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=191bp
MSVCAFLGQLFPRSARRNGGELRCMRRGLSLLDSRWKADVDRKRKATFAS
EDKGMVDAVLMGGFYLPSDSFAMVVEYLDHGTAVRSTPSSKSWWRTISGL
PQASHIDTNLGKRLPWGKLVTQLKTIKASNPLRAVARVTLGCRTKLGSFH
NLGKVVGGVGLTHLDLTRSSGAKKLDFAALAKALPNLRGLA
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