prot_Ecto-sp9_F_contig9143.17337.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9143.17337.1
Unique Nameprot_Ecto-sp9_F_contig9143.17337.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length80
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9143.17337.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSY9_9PHAE)

HSP 1 Score: 132 bits (333), Expect = 1.010e-34
Identity = 69/79 (87.34%), Postives = 70/79 (88.61%), Query Frame = 0 
Query:    2 TGGETSDGSGKAPSPSQALKALVKKLPEGWAELRRAIAAAAKAKKDRSSTPQSGQAEDEGWVDLDYEWANMPFAEALGG 80
            TGGETSDGSGKAPSPSQ+ KALVKK PEGWAELRRAIAAAAKAKK RS TPQ G AEDEGWVDLDYEWANMPF EA  G
Sbjct:   23 TGGETSDGSGKAPSPSQSPKALVKKFPEGWAELRRAIAAAAKAKKGRSGTPQPGPAEDEGWVDLDYEWANMPFTEAPRG 101
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BLAST of mRNA_Ecto-sp9_F_contig9143.17337.1 vs.
Match: Oxidoreductase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHS3_ECTSI)

HSP 1 Score: 128 bits (321), Expect = 7.770e-33
Identity = 69/79 (87.34%), Postives = 69/79 (87.34%), Query Frame = 0 
Query:    2 TGGETSDGSGKAPSPSQALKALVKKLPEGWAELRRAIAAAAKAKKDRSSTPQSGQAEDEGWVDLDYEWANMPFAEALGG 80
            TGGETSDGSGK PSPSQALKALVKKLPEG        AAAAKAKKDRSSTPQSGQAEDEGWVDLDYEWANMPF EALGG
Sbjct:   71 TGGETSDGSGKGPSPSQALKALVKKLPEG--------AAAAKAKKDRSSTPQSGQAEDEGWVDLDYEWANMPFTEALGG 141
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9143.17337.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
Uncharacterized1.010e-3487.34protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Oxidoreductase7.770e-3387.34n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9143contigEcto-sp9_F_contig9143:1231..1950 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9143.17337.1mRNA_Ecto-sp9_F_contig9143.17337.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9143 1231..2683 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9143.17337.1 ID=prot_Ecto-sp9_F_contig9143.17337.1|Name=mRNA_Ecto-sp9_F_contig9143.17337.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=80bp
MTGGETSDGSGKAPSPSQALKALVKKLPEGWAELRRAIAAAAKAKKDRSS
TPQSGQAEDEGWVDLDYEWANMPFAEALGG
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