prot_Ecto-sp9_F_contig9142.17336.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_Ecto-sp9_F_contig9142.17336.1
Unique Name	prot_Ecto-sp9_F_contig9142.17336.1
Type	polypeptide
Organism	Ectocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length	534

Homology

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG5_ECTSI)

HSP 1 Score: 852 bits (2202), Expect = 1.840e-300
Identity = 441/462 (95.45%), Postives = 443/462 (95.89%), Query Frame = 0

Query:   26 MQRVPPAVLASYRALYVVLRGHAAAAEDEINRDIMRTVRGTTGLLLDLSSEDSRSDFAGSINRVLNALAHVDNMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFRSRAVGVDAEGVIVRALSDGGKRGGGG-SPSGGEGVEAKRPSEAGVADGGELGWSTGPDYLLVLRSRHCQTLGLVELREEAKSGLIVEHSSLQDALLAVTRSLGWDSLRTCWLETCLAARSDHERHILASQALRFVIANGGHVKAASFMLGVGGADANEVDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEMAEEACTEGGALDDDPSGAGLASSPSASRAARPTSAW 486
            MQRVPPAVLASYRALYVVLRGHAAAAEDEINRDIMRTVRGTTGLLLDLSSEDSRSDFAGSINRVLNALAHVDNMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFRSRAVGVDAEGVIVRALSDGGKRGGGG SPSGGEGVEAKR SE GVAD GELGWSTGPDYLLVLRSRHCQTLGLVELREEAKSGLIVEHSSLQDALLAVTRSLGWDSLRTCWLETCLAARSDHERH LASQALRFVIANGGHVKAASFMLGVGGADANEVDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEMAEEACTEGGALDD   GA L   P  +  + P  AW
Sbjct:    1 MQRVPPAVLASYRALYVVLRGHAAAAEDEINRDIMRTVRGTTGLLLDLSSEDSRSDFAGSINRVLNALAHVDNMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFRSRAVGVDAEGVIVRALSDGGKRGGGGDSPSGGEGVEAKRSSEGGVADAGELGWSTGPDYLLVLRSRHCQTLGLVELREEAKSGLIVEHSSLQDALLAVTRSLGWDSLRTCWLETCLAARSDHERHTLASQALRFVIANGGHVKAASFMLGVGGADANEVDSRLLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEMAEEACTEGGALDD---GAALGGGPIRAAGSNPARAW 459

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XPB5_9STRA)

HSP 1 Score: 77.4 bits (189), Expect = 2.880e-11
Identity = 58/186 (31.18%), Postives = 89/186 (47.85%), Query Frame = 0

Query:   56 NRDIM-RTVRGTTGLLLD-LSSEDSRSDFAGSINRVLNALAHVD-NMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQ--PLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLK 236
            N+DI  R V  T    LD L S   +S     I RVL A    +  +GYCQG N++V V+++    E + F LF+ L        +Y   +AML   + K E  +   +P+L AHF+ E      ++  W  T F       P + L  LDLF+      +L + + +L E+ + LL  + EG+L+
Sbjct:  450 NKDIYARDVSPTASSRLDALRSPTPKSAVEAKIRRVLRAYTMYNPRVGYCQGMNFLVRVLLEVTANEADVFWLFVGLSEPEINRNLYEPGLAMLQPLLAKFELLVSYHMPELHAHFQREGVHVAAFSTRWFMTLFTSFETFGPAMVLRVLDLFVIDGWRVLLSMGLVVLDELREALLAAELEGILR 635

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BZI8_PYTIN)

HSP 1 Score: 73.2 bits (178), Expect = 4.660e-11
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0

Query:   86 INRVLNA-LAHVDNMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQ--PLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLK 236
            I RVL A + +   +GYCQG N++V ++M+    E + F LF+ L        +Y   + +L     + E     + P+L AHF+ E  P   +A  W  TFF       P + +  LDLF+      +  + + +L E+E  LL  D E +L+
Sbjct:   25 IRRVLRAYVMYNPRVGYCQGMNFLVRLLMEVTDDEADCFWLFVGLSEPELDRNLYEPGLTVLQPLFVRFEAFFSRQKPELFAHFQREGVPVAAFAARWFLTFFSTFETFGPTLVIRLLDLFVIDGWRVIFSMALVVLDELEHELLASDMEAILR 178

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PBW2_CAFRO)

HSP 1 Score: 73.2 bits (178), Expect = 5.090e-11
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = 0

Query:   85 SINRVLNALAHVDN-MGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHF--HGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFR 239
            S+ RVL A A  D+ +GYCQG  ++  V++    PE + F +   L++   +    ++   +  +A     +EG LR   P  AAH EA+H  P ++A  W+ T F  +    V+    D  +A    PV+R+ V+++      +  L+ EG+L   R
Sbjct:    6 SLLRVLRAYAACDDEVGYCQGMAFLAGVLLSF-CPEEDAFLMLFQLMKSEPYMLRRLFLPGLRAVATQCRIIEGLLRDNAPRFAAHLEAQHVMPEMWATSWLMTAFSTSVPFAVTARVWDCLVAEGYKPVVRVAVAVMLRASPHVAKLELEGILMTMR 162

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DQX2_CAFRO)

HSP 1 Score: 73.2 bits (178), Expect = 2.170e-10
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = 0

Query:   85 SINRVLNALAHVDN-MGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHF--HGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFR 239
            S+ RVL A A  D+ +GYCQG  ++  V++    PE + F +   L++   +    ++   +  +A     +EG LR   P  AAH EA+H  P ++A  W+ T F  +    V+    D  +A    PV+R+ V+++      +  L+ EG+L   R
Sbjct:   66 SLLRVLRAYAACDDEVGYCQGMAFLAGVLLSF-CPEEDAFLMLFQLMKSEPYMLRRLFLPGLRAVATQCRIIEGLLRDNAPRFAAHLEAQHVMPEMWATSWLMTAFSTSVPFAVTARVWDCLVAEGYKPVVRVAVAVMLRASPHVAKLELEGILMTMR 222

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C8C0_PYTIN)

HSP 1 Score: 73.2 bits (178), Expect = 3.300e-10
Identity = 46/154 (29.87%), Postives = 74/154 (48.05%), Query Frame = 0

Query:   86 INRVLNA-LAHVDNMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQ--PLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLK 236
            I RVL A + +   +GYCQG N++V ++M+    E + F LF+ L        +Y   + +L     + E     + P+L AHF+ E  P   +A  W  TFF       P + +  LDLF+      +  + + +L E+E  LL  D E +L+
Sbjct:  227 IRRVLRAYVMYNPRVGYCQGMNFLVRLLMEVTDDEADCFWLFVGLSEPELDRNLYEPGLTVLQPLFVRFEAFFSRQKPELFAHFQREGVPVAAFAARWFLTFFSTFETFGPTLVIRLLDLFVIDGWRVIFSMALVVLDELEHELLASDMEAILR 380

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C4S2_PYTOL)

HSP 1 Score: 73.9 bits (180), Expect = 3.400e-10
Identity = 45/166 (27.11%), Postives = 80/166 (48.19%), Query Frame = 0

Query:   74 SSEDSRSDFAGSINRVLNA-LAHVDNMGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQ--PLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLK 236
            S++  R++    I RVL + + +   +GYCQG N++V ++++  + E + F LF+ L    +   +Y   +A+L     + E     + P+L  HF+ E  P   Y   W  T F       P + +  LDLF+      +  + + +L E+E  LL  D E +L+
Sbjct:  429 SAKGKRTELESKIRRVLRSYVMYNPRVGYCQGMNFLVRLLIEVAIDEADCFWLFVGLSEPENDRNLYEPGLAVLQPLFVRFEECFAKQKPELYGHFQQEGVPVAAYTARWFLTLFSKFETFGPTLVIRILDLFVIDGWRTIFSMGLVVLDELESELLQADMETILQ 594

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CI63_CAFRO)

HSP 1 Score: 73.2 bits (178), Expect = 5.040e-10
Identity = 46/158 (29.11%), Postives = 78/158 (49.37%), Query Frame = 0

Query:   85 SINRVLNALAHVDN-MGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHF--HGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFR 239
            S+ RVL A A  D+ +GYCQG  ++  V++    PE + F +   L++   +    ++   +  +A     +EG LR   P  AAH EA+H  P ++A  W+ T F  +    V+    D  +A    PV+R+ V+++      +  L+ EG+L   R
Sbjct:  255 SLLRVLRAYAACDDEVGYCQGMAFLAGVLLSF-CPEEDAFLMLFQLMKSEPYMLRRLFLPGLRAVATQCRIIEGLLRDNAPRFAAHLEAQHVMPEMWATSWLMTAFSTSVPFAVTARVWDCLVAEGYKPVVRVAVAVMLRASPHVAKLELEGILMTMR 411

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=2 Tax=Oikopleura dioica TaxID=34765 RepID=E4XGA2_OIKDI)

HSP 1 Score: 73.6 bits (179), Expect = 5.500e-10
Identity = 54/171 (31.58%), Postives = 83/171 (48.54%), Query Frame = 0

Query:   85 SINRVLNALAHVDN-MGYCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFH-------------GMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLV--ALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFR 239
            ++ RV  A +  D+ +GYCQGQ+++V  ++   +PE E F LF  ++ + HF              G+Y    + L      LE  +   LP L  HF+       +Y+ +W  T F  A  PL SLV   +D FL    N + RL +++L    + LL  D EG+L+ FR
Sbjct:  456 ALYRVCKAYSLYDSEVGYCQGQSFLVAALLTVQMPEEEAFALFTTIMHEYHFRFTTFSNQLVTGLRGLYLHSFSELRLRFWILEQLVESELPSLHTHFKDLGVEAHMYSSQWFLTLF-TAKFPL-SLVYHVIDWFLLEGPNVIYRLSLAMLRTWRRDLLSYDFEGVLRFFR 624

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BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Match: Rab-GAP (TBC domain-containing protein n=24 Tax=Phytophthora TaxID=4783 RepID=V9F4Q0_PHYPR)

HSP 1 Score: 68.6 bits (166), Expect = 1.660e-8
Identity = 73/263 (27.76%), Postives = 112/263 (42.59%), Query Frame = 0

Query:   24 TWMQRVPPAVLASYRALYVVLRG----------HAAAAEDEINRDIMRTVRGTTGLLLDLSSEDSRSDFAGSINRVLNALAH-VDNMGYCQGQNYVVDVMMKA-------------GLPERET-FCLFLYLLRQGHFHGMYRKEVAMLAGYMDKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVALDLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFRSRA-VGVD----AEGVIVRALS 256
            T M+ VP    AS R  Y+ L G               E EI+RDI RT          L SE+   D    +  VL A+AH  D++GYCQG NYVV  ++ A             GL  +E  F L L L+R+     +++ ++  L+  +   +  L+    DL+AHF        +   +W  T F         +   DL        V R+ +++  E+   LL +D EG  + FR    +G++     + ++ RALS
Sbjct:   77 TLMKEVPDG--ASRRDFYLKLAGIESLEGKATLETTGVEGEIDRDIERTFPANP-----LFSEEG--DGRRLLGNVLKAVAHYADDVGYCQGMNYVVAALLIAMKDAQDISDLDLHGLSMQEAAFWLTLALIRRKGMAELWKHKMPGLSQCIYLFQQLLKLHFYDLSAHFRQIGMHSSILVTQWFVTIFARVLTIPTLIRVWDLVYLDGWKAVYRVALAITAELRPKLLAMDLEGCSEFFRKNPKLGLEEVLSTDVLLQRALS 330

The following BLAST results are available for this feature:

BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.

BLAST of mRNA_Ecto-sp9_F_contig9142.17336.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
Uncharacterized	1.840e-300	95.45	protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQG5...	[more]
Rab-GAP	2.880e-11	31.18	TBC domain-containing protein n=1 Tax=Pythium bras...	[more]
Rab-GAP	4.660e-11	29.87	TBC domain-containing protein n=1 Tax=Pythium insi...	[more]
Hypothetical	5.090e-11	29.11	protein (Fragment) n=1 Tax=Cafeteria roenbergensis...	[more]
Rab-GAP	2.170e-10	29.11	TBC domain-containing protein n=3 Tax=Cafeteria ro...	[more]
Rab-GAP	3.300e-10	29.87	TBC domain-containing protein n=1 Tax=Pythium insi...	[more]
Uncharacterized	3.400e-10	27.11	protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep...	[more]
Rab-GAP	5.040e-10	29.11	TBC domain-containing protein n=1 Tax=Cafeteria ro...	[more]
Rab-GAP	5.500e-10	31.58	TBC domain-containing protein n=2 Tax=Oikopleura d...	[more]
Rab-GAP	1.660e-8	27.76	TBC domain-containing protein n=24 Tax=Phytophthor...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR036770	Ankyrin repeat-containing domain superfamily	GENE3D	1.25.40.20		coord: 346..458 e-value: 1.6E-8 score: 36.5
IPR036770	Ankyrin repeat-containing domain superfamily	SUPERFAMILY	48403	Ankyrin repeat	coord: 373..430
None	No IPR available	GENE3D	1.10.8.270		coord: 33..137 e-value: 9.9E-10 score: 40.1
None	No IPR available	GENE3D	1.10.472.80		coord: 138..250 e-value: 3.7E-13 score: 51.4
None	No IPR available	PANTHER	PTHR22957:SF212	ECOTROPIC VIRAL INTEGRATION SITE 5 PROTEIN HOMOLOG	coord: 49..246
None	No IPR available	PANTHER	PTHR22957	TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN	coord: 49..246
IPR000195	Rab-GTPase-TBC domain	PFAM	PF00566	RabGAP-TBC	coord: 52..226 e-value: 3.6E-22 score: 79.1
IPR000195	Rab-GTPase-TBC domain	PROSITE	PS50086	TBC_RABGAP	coord: 1..207 score: 12.362
IPR020683	Ankyrin repeat-containing domain	PROSITE	PS50297	ANK_REP_REGION	coord: 391..432 score: 9.967
IPR035969	Rab-GTPase-TBC domain superfamily	SUPERFAMILY	47923	Ypt/Rab-GAP domain of gyp1p	coord: 50..167
IPR035969	Rab-GTPase-TBC domain superfamily	SUPERFAMILY	47923	Ypt/Rab-GAP domain of gyp1p	coord: 149..255

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Ecto-sp9_F_contig9142	contig	Ecto-sp9_F_contig9142:15..2652 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_Ecto-sp9_F_contig9142.17336.1	mRNA_Ecto-sp9_F_contig9142.17336.1	Ectocarpus species9 EcSCA_722f female	mRNA	Ecto-sp9_F_contig9142 13..2652 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_Ecto-sp9_F_contig9142.17336.1 ID=prot_Ecto-sp9_F_contig9142.17336.1|Name=mRNA_Ecto-sp9_F_contig9142.17336.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=534bp
LAENGTKLAPCDARALKDLCAGVTWMQRVPPAVLASYRALYVVLRGHAAA
AEDEINRDIMRTVRGTTGLLLDLSSEDSRSDFAGSINRVLNALAHVDNMG
YCQGQNYVVDVMMKAGLPERETFCLFLYLLRQGHFHGMYRKEVAMLAGYM
DKLEGQLRGRLPDLAAHFEAEHYPPPLYALEWITTFFGLAAQPLVSLVAL
DLFLAGARNPVLRLCVSLLGEMEQGLLGLDQEGLLKDFRSRAVGVDAEGV
IVRALSDGGKRGGGGSPSGGEGVEAKRPSEAGVADGGELGWSTGPDYLLV
LRSRHCQTLGLVELREEAKSGLIVEHSSLQDALLAVTRSLGWDSLRTCWL
ETCLAARSDHERHILASQALRFVIANGGHVKAASFMLGVGGADANEVDSR
LLSPLHLVAMFNRPDIARVLLMCGASPRLVGGVTRAAAARGGKLWSPLEM
AEEACTEGGALDDDPSGAGLASSPSASRAARPTSAWGSSTCLEELQRSGK
AVVAAVPGGGGGGGGGEGPVQGGGGEGVGWGGPH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR036770	Ankyrin_rpt-contain_sf
IPR000195	Rab-GTPase-TBC_dom
IPR020683	Ankyrin_rpt-contain_dom
IPR035969	Rab-GTPase_TBC_sf