prot_Ecto-sp9_F_contig9140.17333.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9140.17333.1
Unique Nameprot_Ecto-sp9_F_contig9140.17333.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length334
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9140.17333.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSW8_ECTSI)

HSP 1 Score: 496 bits (1276), Expect = 1.720e-166
Identity = 313/335 (93.43%), Postives = 316/335 (94.33%), Query Frame = 0 
Query:    1 MEVDLASFLAPAGDLLGEVSQRVLEFLSVRDLIEYVASSSPTSPECGGDSDADTAERVTREEADYPENPRRRRQHPGRGRDFEGQPLRGGGSGPATTGRNLSPEEEVPHRLHSNNGGMHS-STTGAGDEAGGGPRPPSPYLSAKTDPRRRDNKQQEWGGDVDTECSNYDNSSSRFVGDCSTATAAGGLASTLGGECSPRTRGSSGCGVQVVVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSPSIFGVLVGLGLHPWATLQGGVAAXXXXXXXXXXXXPLLALLRWAAGGASAVLGVSFRVALLPYDVTKGAVAYVVGSLEAMLNIATEV 334
            MEVDLASFLAPAGDLLGEVSQRVLEFLSVRDLIEYVASSSPTSPECGGD DADTAERVT++EADYPENPRRRRQH   GRDFE QPLRGG SGPAT GRNLSPEEEVPHRLHSNNG MH  STTGAGDEAGGG RPPSPYLSAKTDPRRRDNKQQEW GDVDTECSNYDNSSSRFVGDCSTAT AGGLASTLGGECSPRT GSSGCGV VVV  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX  RSPSIFGVLVGLGLHPWATLQGGVAAXXXXXXXXXXXXPLLALLRWAAGGASAVLGVSFRVALLPYDVTKGAVAYVVGSLEAMLNIATE+
Sbjct:    1 MEVDLASFLAPAGDLLGEVSQRVLEFLSVRDLIEYVASSSPTSPECGGDRDADTAERVTKDEADYPENPRRRRQHSVSGRDFERQPLRGGSSGPATMGRNLSPEEEVPHRLHSNNGSMHFISTTGAGDEAGGGSRPPSPYLSAKTDPRRRDNKQQEWEGDVDTECSNYDNSSSRFVGDCSTATPAGGLASTLGGECSPRTGGSSGCGVHVVVVGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRRRSPSIFGVLVGLGLHPWATLQGGVAAXXXXXXXXXXXXPLLALLRWAAGGASAVLGVSFRVALLPYDVTKGAVAYVVGSLEAMLNIATEI 335
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9140.17333.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.720e-16693.43protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSW8... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableTMHMMTMhelixcoord: 286..308
NoneNo IPR availableTMHMMTMhelixcoord: 249..271

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9140contigEcto-sp9_F_contig9140:188..1189 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9140.17333.1mRNA_Ecto-sp9_F_contig9140.17333.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9140 188..1189 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9140.17333.1 ID=prot_Ecto-sp9_F_contig9140.17333.1|Name=mRNA_Ecto-sp9_F_contig9140.17333.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=334bp
MEVDLASFLAPAGDLLGEVSQRVLEFLSVRDLIEYVASSSPTSPECGGDS
DADTAERVTREEADYPENPRRRRQHPGRGRDFEGQPLRGGGSGPATTGRN
LSPEEEVPHRLHSNNGGMHSSTTGAGDEAGGGPRPPSPYLSAKTDPRRRD
NKQQEWGGDVDTECSNYDNSSSRFVGDCSTATAAGGLASTLGGECSPRTR
GSSGCGVQVVVVGGRRRVAKGGLLGPASRSSSSSSSSPKKESRRRSPSIF
GVLVGLGLHPWATLQGGVAALQGGVAHLLGGVPLLALLRWAAGGASAVLG
VSFRVALLPYDVTKGAVAYVVGSLEAMLNIATEV
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