prot_Ecto-sp9_F_contig9128.17318.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9128.17318.1
Unique Nameprot_Ecto-sp9_F_contig9128.17318.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length52
Homology
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM2_ECTSI)

HSP 1 Score: 104 bits (260), Expect = 2.340e-25
Identity = 50/51 (98.04%), Postives = 50/51 (98.04%), Query Frame = 0
Query:    1 LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            LKT LQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL
Sbjct:  360 LKTALQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 410          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Uncharacterized (protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WBA9_VAULI)

HSP 1 Score: 67.4 bits (163), Expect = 6.900e-12
Identity = 33/51 (64.71%), Postives = 38/51 (74.51%), Query Frame = 0
Query:    1 LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            LK  L  I+S SL+D G NVLAAE++WTPE+  EVL RE  I DFPELMDL
Sbjct:  281 LKNALSKISSDSLTDDGMNVLAAELIWTPEDAREVLDRESIIQDFPELMDL 331          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CU48_9STRA)

HSP 1 Score: 64.7 bits (156), Expect = 7.280e-11
Identity = 27/51 (52.94%), Postives = 41/51 (80.39%), Query Frame = 0
Query:    1 LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            L+  LQT+A+ +++D G+NVLA EVLWTP++  +VL++ D I D+PEL+DL
Sbjct:  332 LREALQTLAADAMTDDGENVLATEVLWTPQDESDVLSKRDLIQDYPELIDL 382          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Predicted (protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7FQ47_PHATC)

HSP 1 Score: 60.8 bits (146), Expect = 1.420e-9
Identity = 27/50 (54.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 KTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            K VL  IAS  + + GDNV A E+ WTP +P EVL++ D I DFPEL+D+
Sbjct:  250 KKVLSNIASDCMVEEGDNVNAVEIFWTPSDPEEVLSKNDMIIDFPELIDM 299          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HYS6_9ALVE)

HSP 1 Score: 57.0 bits (136), Expect = 2.390e-9
Identity = 25/49 (51.02%), Postives = 35/49 (71.43%), Query Frame = 0
Query:    1 LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELM 49
            L+  L+ +   S++D G NVLAAEVLWTP+ P  VL + + IAD+PEL+
Sbjct:   40 LREALELLGGNSMTDQGGNVLAAEVLWTPQAPGAVLDQTEMIADYPELI 88          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Hypothetical (protein n=1 Tax=Thalassionema nitzschioides TaxID=33649 RepID=A0A7S1E3V6_9STRA)

HSP 1 Score: 57.0 bits (136), Expect = 3.090e-9
Identity = 28/50 (56.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 KTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            K VL +IAS  + + GD + A EV WTP E  EVLT++D I DFPEL+DL
Sbjct:   52 KEVLSSIASDVMVERGDCLNAVEVFWTPSERDEVLTKQDIILDFPELIDL 101          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L638_9STRA)

HSP 1 Score: 54.7 bits (130), Expect = 1.160e-7
Identity = 26/50 (52.00%), Postives = 35/50 (70.00%), Query Frame = 0
Query:    2 KTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            K VLQ+IAS ++ + GD V A EV W P +  EVL+++D I DFPEL+ L
Sbjct:  140 KEVLQSIASNAMVEDGDFVNAVEVFWAPGDSEEVLSQQDLIVDFPELVTL 189          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Uncharacterized (protein n=1 Tax=Guillardia theta (strain CCMP2712) TaxID=905079 RepID=L1J5N6_GUITC)

HSP 1 Score: 54.3 bits (129), Expect = 3.310e-7
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            LK  L ++ + +L++  D+++AAE+LW PEEPWE LT +D I ++P L+ L
Sbjct:  257 LKEALMSLGTEALNE--DSLVAAELLWVPEEPWESLTADDVILEYPNLLSL 305          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Hypothetical (protein n=1 Tax=Guillardia theta TaxID=55529 RepID=A0A7S4P475_GUITH)

HSP 1 Score: 54.3 bits (129), Expect = 3.530e-7
Identity = 23/51 (45.10%), Postives = 37/51 (72.55%), Query Frame = 0
Query:    1 LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            LK  L ++ + +L++  D+++AAE+LW PEEPWE LT +D I ++P L+ L
Sbjct:  348 LKEALMSLGTEALNE--DSLVAAELLWVPEEPWESLTADDVILEYPNLLSL 396          
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Match: Hypothetical (protein n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A6U4YZC0_HEMAN)

HSP 1 Score: 53.9 bits (128), Expect = 4.820e-7
Identity = 22/41 (53.66%), Postives = 31/41 (75.61%), Query Frame = 0
Query:   11 GSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMDL 51
            GS   G D++LAAEV+WTPEEPWE +T ++ I D+P+ + L
Sbjct:  350 GSDVVGNDSLLAAEVMWTPEEPWETMTPDEVILDYPDHIPL 390          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9128.17318.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized2.340e-2598.04protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LDM2... [more]
Uncharacterized6.900e-1264.71protein n=1 Tax=Vaucheria litorea TaxID=109269 Rep... [more]
Uncharacterized7.280e-1152.94protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
Predicted1.420e-954.00protein n=2 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Uncharacterized2.390e-951.02protein (Fragment) n=1 Tax=Chromera velia CCMP2878... [more]
Hypothetical3.090e-956.00protein n=1 Tax=Thalassionema nitzschioides TaxID=... [more]
Hypothetical1.160e-752.00protein n=1 Tax=Amphora coffeiformis TaxID=265554 ... [more]
Uncharacterized3.310e-745.10protein n=1 Tax=Guillardia theta (strain CCMP2712)... [more]
Hypothetical3.530e-745.10protein n=1 Tax=Guillardia theta TaxID=55529 RepID... [more]
Hypothetical4.820e-753.66protein n=1 Tax=Hemiselmis andersenii TaxID=464988... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010903Protein of unknown function DUF1517PFAMPF07466DUF1517coord: 1..51
e-value: 1.2E-12
score: 48.4

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9128contigEcto-sp9_F_contig9128:2813..2968 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9128.17318.1mRNA_Ecto-sp9_F_contig9128.17318.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9128 2813..2968 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9128.17318.1 ID=prot_Ecto-sp9_F_contig9128.17318.1|Name=mRNA_Ecto-sp9_F_contig9128.17318.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=52bp
LKTVLQTIASGSLSDGGDNVLAAEVLWTPEEPWEVLTREDAIADFPELMD
L*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010903DUF1517