prot_Ecto-sp9_F_contig9067.17255.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9067.17255.1
Unique Nameprot_Ecto-sp9_F_contig9067.17255.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length82
Homology
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68_ECTSI)

HSP 1 Score: 152 bits (385), Expect = 3.860e-46
Identity = 81/81 (100.00%), Postives = 81/81 (100.00%), Query Frame = 0
Query:    1 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 81
            MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK
Sbjct:   55 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 135          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: 40S (ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U6J8_9STRA)

HSP 1 Score: 122 bits (306), Expect = 4.460e-34
Identity = 67/78 (85.90%), Postives = 70/78 (89.74%), Query Frame = 0
Query:    4 LFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 81
            LFGFRT FGGGKSTGF LIYD++ED KKFEPKHRL RAGL  KKETSRKQIKEAKNR KKIRGTGRR+AKHKAKKA K
Sbjct:   60 LFGFRTAFGGGKSTGFALIYDTLEDAKKFEPKHRLVRAGLVVKKETSRKQIKEAKNRAKKIRGTGRRLAKHKAKKANK 137          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2US90_9STRA)

HSP 1 Score: 121 bits (304), Expect = 8.480e-34
Identity = 67/80 (83.75%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    2 VTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 81
            V+LFGFRT FGG KSTGFCLIYDSVED KKFEPK RL R GL +K ETSRKQIKEAKNR KKIRGTGRRIA+HKAKKA K
Sbjct:   57 VSLFGFRTAFGGNKSTGFCLIYDSVEDAKKFEPKFRLVRLGLAEKTETSRKQIKEAKNRGKKIRGTGRRIARHKAKKANK 136          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YI50_AURAN)

HSP 1 Score: 120 bits (302), Expect = 1.760e-33
Identity = 63/81 (77.78%), Postives = 72/81 (88.89%), Query Frame = 0
Query:    1 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 81
            +++LFGFR  FGGGKSTGFCLIYDS E  KK+EPK+RL R G+ +KKETSRKQIKEAKNR+KK+RGTGRRIA HKAKKAAK
Sbjct:   55 LISLFGFRNKFGGGKSTGFCLIYDSAEAAKKYEPKYRLIRNGIVEKKETSRKQIKEAKNRKKKVRGTGRRIANHKAKKAAK 135          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=A0A7S4HQJ4_9STRA)

HSP 1 Score: 118 bits (296), Expect = 1.440e-32
Identity = 60/80 (75.00%), Postives = 70/80 (87.50%), Query Frame = 0
Query:    1 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAA 80
            +  LFGFRT FGGGKSTGFCL+YDS E ++KFEPKHRL R G+Q+KKETSRK +KEAKN+ KK+RGTGR IAKHKAK+AA
Sbjct:   55 LTVLFGFRTKFGGGKSTGFCLVYDSEEALRKFEPKHRLVRQGIQEKKETSRKAMKEAKNKGKKVRGTGRSIAKHKAKRAA 134          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2WEF7_9STRA)

HSP 1 Score: 115 bits (289), Expect = 2.220e-31
Identity = 64/85 (75.29%), Postives = 71/85 (83.53%), Query Frame = 0
Query:    1 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKK----IRGTGRRIAKHKAKKAAK 81
            +++LFGFR  FGGGKSTGFCLIYDS E  KK+EPK+RL R G  +KKETSRKQIKEAKNR+KK    IRGTGRRIA HKAKKAAK
Sbjct:   61 LISLFGFRNKFGGGKSTGFCLIYDSAESAKKYEPKYRLVRNGFVEKKETSRKQIKEAKNRKKKQIRQIRGTGRRIANHKAKKAAK 145          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Predicted (protein n=3 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G2B5_PHATC)

HSP 1 Score: 114 bits (286), Expect = 4.750e-31
Identity = 61/80 (76.25%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    1 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAA 80
            +  LFGFRT FGGGKSTGFCLIYD+ E M+KFEPKHRL R GL +KKE SRK IKEAKN+ KKIRGTG  IAKHKAK+AA
Sbjct:   55 LTVLFGFRTKFGGGKSTGFCLIYDNEESMRKFEPKHRLIRQGLVEKKEQSRKAIKEAKNKAKKIRGTGASIAKHKAKRAA 134          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Hypothetical (protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3P839_9STRA)

HSP 1 Score: 112 bits (281), Expect = 6.520e-30
Identity = 60/80 (75.00%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    1 MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAA 80
            +V LFGFRT FGGGKSTGFCLIYDS + M+KFEPKHR+ RAG+ +KKE SRK IKEAKN+  KIRGTG  IAKHKAK+AA
Sbjct:   86 LVVLFGFRTKFGGGKSTGFCLIYDSEDAMRKFEPKHRVIRAGMAEKKEQSRKAIKEAKNKGLKIRGTGASIAKHKAKRAA 165          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FWG9_9STRA)

HSP 1 Score: 111 bits (278), Expect = 8.030e-30
Identity = 60/80 (75.00%), Postives = 67/80 (83.75%), Query Frame = 0
Query:    2 VTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 81
            + L GF THFGGGK+TGFC IYD++E  KKFEPK R  R GL +K ETSRKQIKEAKN++KKIRGTGRRIA HKAKKAAK
Sbjct:   58 IFLSGFLTHFGGGKTTGFCCIYDNIEAAKKFEPKFRCIRNGLMEKTETSRKQIKEAKNKRKKIRGTGRRIAAHKAKKAAK 137          
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Match: 40S (ribosomal protein S24 n=3 Tax=Albugo TaxID=65356 RepID=F0WPH7_9STRA)

HSP 1 Score: 111 bits (277), Expect = 1.110e-29
Identity = 61/80 (76.25%), Postives = 68/80 (85.00%), Query Frame = 0
Query:    2 VTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETSRKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK 81
            V L+GFRT FGGGKSTGF LIYDSV D K+FEPK+RL R GL +K E+SRKQIKEAKNR+KKIRG GRRIA+HKA KA K
Sbjct:   58 VVLYGFRTQFGGGKSTGFGLIYDSVNDAKRFEPKYRLIRQGLAEKVESSRKQIKEAKNRKKKIRGVGRRIARHKAAKANK 137          
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9067.17255.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized3.860e-46100.00protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FQ68... [more]
40S4.460e-3485.90ribosomal protein S24 n=2 Tax=Monodopsidaceae TaxI... [more]
Hypothetical8.480e-3483.75protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Uncharacterized1.760e-3377.78protein n=1 Tax=Aureococcus anophagefferens TaxID=... [more]
Hypothetical1.440e-3275.00protein n=2 Tax=Odontellaceae TaxID=2749909 RepID=... [more]
Hypothetical2.220e-3175.29protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Predicted4.750e-3176.25protein n=3 Tax=Phaeodactylum tricornutum TaxID=28... [more]
Hypothetical6.520e-3075.00protein n=1 Tax=Amphora coffeiformis TaxID=265554 ... [more]
Hypothetical8.030e-3075.00protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
40S1.110e-2976.25ribosomal protein S24 n=3 Tax=Albugo TaxID=65356 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 40..60
NoneNo IPR availableGENE3D3.30.70.3370coord: 1..81
e-value: 1.4E-32
score: 114.1
NoneNo IPR availablePRODOMPD006052coord: 1..30
e-value: 2.0E-7
score: 126.0
IPR001976Ribosomal protein S24ePFAMPF01282Ribosomal_S24ecoord: 2..48
e-value: 2.4E-22
score: 78.6
IPR001976Ribosomal protein S24ePANTHERPTHR1049640S RIBOSOMAL PROTEIN S24coord: 2..79
IPR012678Ribosomal protein L23/L15e core domain superfamilySUPERFAMILY54189Ribosomal proteins S24e, L23 and L15ecoord: 2..53

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9067contigEcto-sp9_F_contig9067:762..1527 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9067.17255.1mRNA_Ecto-sp9_F_contig9067.17255.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9067 741..2104 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9067.17255.1 ID=prot_Ecto-sp9_F_contig9067.17255.1|Name=mRNA_Ecto-sp9_F_contig9067.17255.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=82bp
MVTLFGFRTHFGGGKSTGFCLIYDSVEDMKKFEPKHRLARAGLQDKKETS
RKQIKEAKNRQKKIRGTGRRIAKHKAKKAAK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001976Ribosomal_S24e
IPR012678Ribosomal_L23/L15e_core_dom_sf