prot_Ecto-sp9_F_contig9066.17253.1 (polypeptide) Ectocarpus species9 EcSCA_722f female

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_Ecto-sp9_F_contig9066.17253.1
Unique Nameprot_Ecto-sp9_F_contig9066.17253.1
Typepolypeptide
OrganismEctocarpus species9 EcSCA_722f female (Ectocarpus species9 EcSCA_722f female)
Sequence length332
Homology
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BLAST of mRNA_Ecto-sp9_F_contig9066.17253.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR82_9PHAE)

HSP 1 Score: 381 bits (979), Expect = 1.320e-117
Identity = 236/321 (73.52%), Postives = 245/321 (76.32%), Query Frame = 0 
Query:    4 VSSRGREGSGWGRRLNPAPPRQATEMLLSLSGSTTTENQQRGLSMPESXXXXXXXXXXXXPRSPSNTGHDVLTGAGAAAGVVKHGSMPIVGGWDELALGASTAAGSRAGRGSADGXXXXXXXXXXSRHA-----KEHGANGGSFTAPVLVDLAFADGAGPAAGGGIGANGGATRASAAATGVRGGFRVGRMSRSAERPQQDVSLPMRSPMGLSQQGHPQQQYFGGIQRAISVGHPVARGWDGGVSPSSAAGRPEPTGMRAATPPLGQHHQYNTGPSQPPPHPPEPCVFGQNPPPRNPPPGRALPRPPSPASFAGYGEPQQG 319
            V+SRGR+GSGWGRRLNPAPP+QATEMLL LSGSTT ENQ++GLSMPES            PRSP +TGHDVL GAGAAAG  K GSMPIVGGWDELALGASTAAG+RAGRGSA  XXXXXXXXXX         KEHGA+ GSFTAPVLVDLAF DG GPAAGGGI      TRASAAA GVRGG  VG M RSAERPQQDVSL MRSP+GLSQQGHPQQQYFGGIQRAISVGHPVARGWDGGV PS AAGRP PTGMRAATPPLGQ HQY TG                        PGRALPRPPSPASFAGYGE  QG
Sbjct:  326 VASRGRDGSGWGRRLNPAPPQQATEMLLLLSGSTTAENQRKGLSMPESSGRASPTTTT--PRSPFSTGHDVLAGAGAAAGAAKQGSMPIVGGWDELALGASTAAGARAGRGSAXXXXXXXXXXXXXXXXXXXXXKEHGASSGSFTAPVLVDLAFDDGTGPAAGGGIXXXXXXTRASAAAAGVRGGVCVGGMPRSAERPQQDVSLSMRSPVGLSQQGHPQQQYFGGIQRAISVGHPVARGWDGGVPPSPAAGRPGPTGMRAATPPLGQPHQYTTGXXXXXXXXXXXXXXXXXXXXXXXXPGRALPRPPSPASFAGYGEHHQG 644
The following BLAST results are available for this feature:
BLAST of mRNA_Ecto-sp9_F_contig9066.17253.1 vs.
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
Uncharacterized1.320e-11773.52protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Ecto-sp9_F_contig9066contigEcto-sp9_F_contig9066:1976..2971 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus species9 EcSCA_722f female2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus species9 EcSCA_722f female vs UniRef902022-09-16
OGS1.0 of Ectocarpus species9 EcSCA_722f female2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_Ecto-sp9_F_contig9066.17253.1mRNA_Ecto-sp9_F_contig9066.17253.1Ectocarpus species9 EcSCA_722f femalemRNAEcto-sp9_F_contig9066 1976..2972 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_Ecto-sp9_F_contig9066.17253.1 ID=prot_Ecto-sp9_F_contig9066.17253.1|Name=mRNA_Ecto-sp9_F_contig9066.17253.1|organism=Ectocarpus species9 EcSCA_722f female|type=polypeptide|length=332bp
ASSVSSRGREGSGWGRRLNPAPPRQATEMLLSLSGSTTTENQQRGLSMPE
SSGGASPTTTTTTPRSPSNTGHDVLTGAGAAAGVVKHGSMPIVGGWDELA
LGASTAAGSRAGRGSADGGQQQQQQQQRSRHAKEHGANGGSFTAPVLVDL
AFADGAGPAAGGGIGANGGATRASAAATGVRGGFRVGRMSRSAERPQQDV
SLPMRSPMGLSQQGHPQQQYFGGIQRAISVGHPVARGWDGGVSPSSAAGR
PEPTGMRAATPPLGQHHQYNTGPSQPPPHPPEPCVFGQNPPPRNPPPGRA
LPRPPSPASFAGYGEPQQGAPHHHHHHPPPPP
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